Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0164 ATGGCTTTGTCCTTGTTCCAAAACCCCAACTTTCTTAAATCCCCACTCCAATCTCAGCCCCAAATCGCCACCGCTACCACCACCGCGCGCTGTGGCTACCTTCGGGTGAGGTGCGGCGGACCGCGGTCTCAGCGTGGACCGCTGGTGAAAGGTCGAATCCTGAGCATCGAAGCAATCCAAGCCATCCAAACCCTAAAACGTCTTCACCGAACCAACCCTCCCAACCTGTCCTCCCAACTCTCTAACACCCTCACGCGCCTCCTCAAATCCGACCTCCTCGCCACCCTCCGAGAGCTTCTACGCCAACGCCACTGCGCCCTCGCCCTCCGTGTCTTCTCGACTCTCCGATCGGAATACGGCGCCGAGTTATCCCTCTATGCCGAGATGGTGCAGGCCCTCACCGCCTGCGATATGCACGAGGACGTGGACCGTCTGATCCTCGACCTCGAAGATGAAAATGAAATCAAGTGCGACGACCATAAGGGGCTTGCCAGCTTGATCAAGGCCGTTGTTACTGCTCGGAGGAAAGAATCAACACTCAGGATTTACGACTTGATGAAGAAGTGTGGATATGGAACCGTCGCTGAGCTCGATGAGTACGTGTTTAAGGTTTTGGTTTCTGCTTTCAAGAGTTTCGGGGAAGAGGCTCTTGCTGAAGAACTTCAACAGCATTACAAAATGTCGCTTGCTAAGTCTCAACTCAACACCTTGCGCATTTAG 720 0.5417 MALSLFQNPNFLKSPLQSQPQIATATTTARCGYLRVRCGGPRSQRGPLVKGRILSIEAIQAIQTLKRLHRTNPPNLSSQLSNTLTRLLKSDLLATLRELLRQRHCALALRVFSTLRSEYGAELSLYAEMVQALTACDMHEDVDRLILDLEDENEIKCDDHKGLASLIKAVVTARRKESTLRIYDLMKKCGYGTVAELDEYVFKVLVSAFKSFGEEALAEELQQHYKMSLAKSQLNTLRI* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0164 239 PANTHER PROTEIN THYLAKOID ASSEMBLY 8, CHLOROPLASTIC 10 231 - -
Vra9g0164 239 Gene3D Tetratricopeptide repeat domain 53 228 IPR011990 GO:0005515
Vra9g0164 239 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 10 231 IPR044190 GO:0000373|GO:0003723|GO:0009658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0164 Vra-Chr9 1108539 1109584 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0164 - - gmx:100788379 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0164 9 1108539 1109584 Vra9g0164 9 1108539 1109584 ECH