Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0161 ATGGCAGAGGATTGGAAGCAAACAGCTCTTCTTGTCATCGACATGCAGAAAGATTTCATAGAAGATTGGAGTCCTGTGGCACTAAAAGCAGGGAAAGACATTGTTCCAAATGTTGTTAAGGCCGTGGAAATTGCAAGGGAGCGTGGCATGCTCATCGTTTGGGTAGTACGAGAAAACGATCTCTTAGGAAGAGATGTTGAGCTTTTTCGGAGGCATTATTATACAGAGAAGAAAGCAAAAATAGGGTGTAAAGGAAGTGAAGGTGCAGCATTAGTTGATGGGTTGGTAATCAAAGAAGAGGATTATAAACTTGTGAAAACCAGGTTCAGTGCATTCTTTGCTACACACCTTCATTCGGTTCTTCATGCTGCAGGAATTCATAATTTGGTGATCACTGGAATTCAAACTCCAAATTGTATCAGACAAACTGTGTTTGATGCTGTAGCGTTGGATTATCCAAAAGTGACTGTTATTGTTGATGCTACTGCAGCAGCCACACCAGATGTTCATCAAGCGAATTTGTTTGACATGGAAAATGTTGGAGTTGCAACCCCAACTTTACAAGAATGGAGTGAAGCCAAAGCTTGA 588 0.4133 MAEDWKQTALLVIDMQKDFIEDWSPVALKAGKDIVPNVVKAVEIARERGMLIVWVVRENDLLGRDVELFRRHYYTEKKAKIGCKGSEGAALVDGLVIKEEDYKLVKTRFSAFFATHLHSVLHAAGIHNLVITGIQTPNCIRQTVFDAVALDYPKVTVIVDATAAATPDVHQANLFDMENVGVATPTLQEWSEAKA* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0161 195 CDD cysteine_hydrolases 9 178 - -
Vra9g0161 195 Gene3D - 2 195 IPR036380 -
Vra9g0161 195 PANTHER OS02G0276400 PROTEIN 1 192 - -
Vra9g0161 195 Pfam Isochorismatase family 8 183 IPR000868 -
Vra9g0161 195 SUPERFAMILY Isochorismatase-like hydrolases 4 192 IPR036380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0161 Vra-Chr9 1081499 1083232 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0161 - - gmx:100499982 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0161 9 1081499 1083232 Vra9g0161 9 1081499 1083232 ECH