Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0153 ATGGCTTCTCTTGCAACCTTAGCTGCTGTTCAACCGGCTGCGATCAATGGCCTTGCTGGAAGCTCCCTCACTGGAACTAAGCTCTCTTTCAAGCCCTCTCGTCAGAGTATCAAATCCAAGAACTTCAGGAGTGGTGCTGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATTTGGGCAACACCACAGGGCAGTGGGACTTGTATGGCTCGGATGCACCTTCACCCTACAACCCTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTTACAAAGAGAGGATTGCTACTCAAGTTTCTGATATTGGGAGGAGGATCCACCTTGGCATACTTGAGTGCAACAGCCTCAGGTGATATTCTACCAATCAAGAAGGGTCCACAACTTCCACCAAAGCTTGGCCCTCGTGGCAAGCTCTAA 435 0.4874 MASLATLAAVQPAAINGLAGSSLTGTKLSFKPSRQSIKSKNFRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSATASGDILPIKKGPQLPPKLGPRGKL* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0153 144 Pfam Photosystem I reaction centre subunit VI 7 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Vra9g0153 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC-LIKE 1 144 - -
Vra9g0153 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Vra9g0153 144 Gene3D - 98 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0153 Vra-Chr9 1015986 1017336 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0153 K02695 - gmx:100499832 229.18