Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0151 ATGGGATCTATCGGAGTACTCCTCGTGGCTAACGTGATACCATACCTGGAGCAGGAGCTCGACAAGCGCTACAAGCTGTTCCGCGCATGGGATTACCCGAACGTGGCGCAGCTGCCGAGTCAGCACGTCACCGCGATCCGCGCGGTGGTCGGAAACGCGAGCGCTGGCGCGGACGCGGCGCTGATCGAGGCGCTGCCGAAGCTGGAGATCGTGTCGAGCTTCAGCGTGGGAGTGGATAAGGTTGACGTGGAGAAGTGCAGAGAGAAGGGGATTCGCGTGACGTACACTCCTGAAGTGTTGACCGATGAGGTCGCGGACCTCGCTATTGGCTTGATGCTGGCAGTCCTCAGGAGAATCTGCGAGAGTGATCGCTTTGTCAGGAGCGGCCAGTGGAAGCGCGGTGACTACAAGTTGACTACTAAGGGAACGTCGAGCGTGAGGATTCCGAATCAGTCTTTGTTGGGTTCCGTTGCGTTGCATTGCGACTCTGTGGAATTCCTAACTCAACCAAACCCTAATTTCGCCGGCGAAATGGAGTCGATCGGAGTACTCCTCGTGGCTCGCGTGTTGCCGTACCTGGACCAAGAGCTCGACAAGCGCTACAAGCTGTTCCGCGCGTGGGAGTACCCGAACCGGGAGCAGCTGCTGAGTCAGCATGCCGCCGCCATCCGTGCGGTGGTCGCAAGCTCGAGCGCCGGCGCGGACGCGGCACTGATCGAGGCGCTGCCGAAGCTTGAGATCGTGTCGAGCTTCAGCGTGGGAGTGGATAAGATTGACAAGGAGAAGTGCAGAGAGAAGGGGATTCCCGTGACCTACACGCCGGACGTGTTGACCGACGAGGTCGCGGATCTCACTATTGGCTTGATACTGGCGCTCCTCAGGAGGATTTGCGAGTGCGACCGATTTGTCAGGAGCGGCCAGTGGAAGCGCGGTAACTACAAGTTGACCACTAAGTTCTCTGGGAAAACTGTTGGCATTATTGGGTTAGGGAGGATAGGGGAAGCCATTGCGAAGAGGGCTGAAGGATTTAAGTGTCCAATAAGCTACTACTCAAGAACTGAAAAACGAGACTCGAAGTACAAGTACTATCCAAGTGTTGTAGAATTAGCATCTAATAGCGACATACTGGTAGTAGCTTGCGCACTGACTGAGGAAACCCATCACATAATCAACAGGGAGGTGATCAATGCACTGGGTCCCAAGGGTTATCTTATCAACATTGGAAGAGGTAAGCATGTTGATGAAACAGAGTTAGTGTCGGCACTTGTAGAAGGTCGTCTTGGTGGGGCTGGGCTAGATGTGTTTGAAAATGAGCCTAGTGTTCCAGAAGAGCTATTTGGGCTTGAAAATGTTGTCTTGCTTCCCCATGTTGGAAGTGCCACAGTAGAAACTCGAACGGCCATGGCCGACCTTGTCCTTGGAAACCTGGAAGCTCATTTCCTTGGAAAGCCGCTGTTAACTCCCTTAATTTAA 1473 0.5424 MGSIGVLLVANVIPYLEQELDKRYKLFRAWDYPNVAQLPSQHVTAIRAVVGNASAGADAALIEALPKLEIVSSFSVGVDKVDVEKCREKGIRVTYTPEVLTDEVADLAIGLMLAVLRRICESDRFVRSGQWKRGDYKLTTKGTSSVRIPNQSLLGSVALHCDSVEFLTQPNPNFAGEMESIGVLLVARVLPYLDQELDKRYKLFRAWEYPNREQLLSQHAAAIRAVVASSSAGADAALIEALPKLEIVSSFSVGVDKIDKEKCREKGIPVTYTPDVLTDEVADLTIGLILALLRRICECDRFVRSGQWKRGNYKLTTKFSGKTVGIIGLGRIGEAIAKRAEGFKCPISYYSRTEKRDSKYKYYPSVVELASNSDILVVACALTEETHHIINREVINALGPKGYLINIGRGKHVDETELVSALVEGRLGGAGLDVFENEPSVPEELFGLENVVLLPHVGSATVETRTAMADLVLGNLEAHFLGKPLLTPLI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0151 490 CDD HPPR 181 480 - -
Vra9g0151 490 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 142 - -
Vra9g0151 490 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 178 490 - -
Vra9g0151 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 278 459 IPR036291 -
Vra9g0151 490 Gene3D - 278 461 - -
Vra9g0151 490 PANTHER D-GLYCERATE DEHYDROGENASE/HYDROXYPYRUVATE REDUCTASE 1 142 - -
Vra9g0151 490 PANTHER D-GLYCERATE DEHYDROGENASE/HYDROXYPYRUVATE REDUCTASE 178 490 - -
Vra9g0151 490 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 286 458 IPR006140 GO:0051287
Vra9g0151 490 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 190 486 IPR006139 GO:0016616|GO:0051287
Vra9g0151 490 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 41 121 IPR006139 GO:0016616|GO:0051287
Vra9g0151 490 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 183 312 - -
Vra9g0151 490 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 135 - -
Vra9g0151 490 Gene3D - 195 484 - -
Vra9g0151 490 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 324 351 IPR029752 -
Vra9g0151 490 Gene3D - 6 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0151 Vra-Chr9 1004917 1010778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0151 - K18606 vra:106774153 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0151 9 1004917 1010778 Vra9g0151 9 1004917 1010778 ECH