Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0147 ATGAACATGCCGCCGAAGCCAAACCAGGTGGTAGTGAGAGACCTCGTCGAGGAAGCCAAAAAACGGATCGTCATCCTCGTTGTATGCGTCGTCGGAATCTCCTATCTCATGTCCTTAACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCTGCAGCCTCCTTGATTATTATTCTCCGCTATTTGTCACTAGATTTTGAAATGAAGAGAAAAGCAGCGGCATACAACAATAAAGCAGGCTCCATCAATGTTCAGTCTTCAAAGAAGCCTGTAGAAAATCCTAAAGTTATTGCAAAGTTTGAATGGAAAACAAAAGTGAATTCTCCTGTCGTTGAGGATGCAATTGATCAATTCACCAGACATTTAATTTCTGAGTGGGTGACAGATCTTTGGTATTCTCGGTTAACACCAGACAAAGAGGGTCCTGAGGAGTTAGTGCAAATAATTAATGGTGTTCTTGGGGAAATTTCAGGACGCATGAGAAACATAAATTTGATAGATTTTTTAATAAGGGATCTTGTTAATGTTATTTGCACACACTTGGAGCTGTTTCGTGCTGCCCATTCAAAGATTGGAAAACATCATACTGGTCCATTAACAATCGAAAGTCGAGACATGGAACTAAAAATTGTTTTGGCTGCTGAGAACAAATTGCATCCTGCATTATTTTCTGCAGAAGCTGAGCATAAGGTTTTGCAGCATCTGATGACTGGCCTTATGCATGCTACTTTCAAGTCTGAGGATTTGCAGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCATGTGCTGTAATACGACCTGTCCTAAACTTAGCAAATCCACGATTTCTTAATGAGAGAATTGAATCCGTAGTGGTTAACAAGACCAAGGTTAACAAGGGGGTTACTGCAGCTCAAGAGGCATCTCACACTAAAGAAGATGAGTTACAGGCTTCCTCTCATGATTTCACCAAGACTTCGGATCCTTCTGTTACTGGTGTTGAGCTTATGCAGCTAAAAAATGGTCAATCCAGAAATGTAGAGACATCTGCAAAACAAAATGCTTGTGATAATGCTATTAAAGATCCATTGCTTTCAGTTTCAGTTGATACTCGATCTTCCCGTACATGGAGCTCATTGTCCGCAAACCCCGAAACTAATGGTGTCCAAAGTATTCAACAACATCGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCATCTCTCGCAGAAAGACCCAAGCTCTTGCTCCTGAACATTTTGAGAATGTGTGGACTAAAGGGAAAAATTACAAGAAAAAAGATGGTGAGAACCAGTCAAATGAGCATGCTACACAGCATCCTGTGGTAGGGAAACTGCCAAAGGTAGACCACATGAAAGCAATTTCTGGACCCAAACAAAGAGATAATAATTCCAAGCTTATTCCCCAAAAGGGGCACCACATTAATTCTGGACACAGTAGTCAATTATCTGTTGAAAATACATCCATTCATGTGGACAAGAATGGATCAAGTTCAGTTACCTCATGTAAAGATGATGAGTCAGTTACATCATACAAAGACGATGAGAACATCCACATTTATGGGCAGATAAGTGATTCAGAGAGCAGTACATCTTATACTTCTGAAGATGACGAAAGTAGTACTGTCACTGGTCTTGATTCCCCTGTCACTAAGGTTTGGGATGGAAGAAGTAATAGAAAGCAGGCAGTTTCTCATGTTCATCACCCACTTGAAAATTTTGACAATCACAGTGCAAAGAAAAGGAGTAAGAGCCATTCTCGCTATTCAAGACTATCCAGAGCCCAATCTGGCAATAAAAGGTCTTGGTCAGGTGTTCATAAAATGCAAACCTGGCAGGAAGTTGAGAGGACAAGCTTTTTATCTGGTGATGGTCAAGACATACTTAATGCTTCAAAATCACATGTGGATTCTGAGTCCAGTGATGATGGTGATATTGAAAGTTTGGGCAGACTTTATAGTGGAGCAGCAGCCTCTTCTTCTGCCCACTCTATTTCTAAAACAGAATCTAGTAGTTTGCCTTTTACTCCCCTGAAAAGTTCCTCTGGGGTAGATTCCTTTTACAAGTTGAGATGTGAGGTCTTAGGTGCAAATATTGTGAAGAGTGGCTCTAAAACATTTGCTGTGTACTCCATATCCGTTACAGATGTAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATAGACGCCTGAAAGAGTTCTCTGAGTATAATCTTCATTTGCCACCAAAACATTTTCTGTCGACTGGTTTAGATGTACCAGTCATTCAAGAGCGGTGTGAATTACTGGATAAATATTTGAAGAAACTTATGCAACTACCAACAGTTTCGGAATCAATTGAAGTGTGGGACTTTCTCAGTGTTGATTCTCAGACTTACATATTCTCAAATTCTTTTTCTATCATGGAAACGTTATCAGCTGGCTTGGATGCCAAGCCATTTGAGAAGACTAAAAACACTGCTCACTTTTCTGCACCTACAAGTGATCCTGTGTCCTTCCGGAGAGAAAATTGTAGTGCTGAAAGTAAAGAGTCAGTTATGAAAGGAAAAAATAATGTTGAGGCCGATGCATTGAGGTCAAAAGTAAACAACATGCCTCTTTCTCTTCCAAAAAAGAATACACATCAACCTATAAAGTCATTTGACAATTCTAGAGGCAATACAGATATTCTAGCACAAAAGAGTGCACCTTCTCCCAATAACTCGCAAAAGCCAGTGAAAGGAAGAGATAGTTCGGATGAGGTCTGTGAAGTGCACCGTGATACTTCTGATGCTTTTCCAACAGAGTGGGTGCCGCCAAATTTGAGTGTACCTATATTGGATTTGGTTGACGTTATCTTACAGGTTCAAGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGTTGCTAAGCAAGTCTTACAACTAGGAATGGGTGACGCATTTGATGACTGGTTGATTGAGAAAATCCAGCTTCTTCGAAAGGGATCAGTGATTGCTTCGGGGGTCAAGCGAGTAGAGCAAATACTCTGGCCTGATGGAATATTCATAACCAAGCATCCAAATAGACGACCACCACCACCACCACCTAGAAACCCATCTCAAAGTTCTCCTCGTGGTAATCAAACTACAGAAGTATCTTCTCCTATTTTGGAAGATGAACAGACACGGGAGGCAGATCGGCGAGCAAAATTTGTATATGAGCTAATGATTGATCATGCACCACCAGCAATTGTAGGTCTTGTTGGTCGGAAGGAGTATGAGCAAAGTGCTAGAGATCTATATTTTTTCCTTCAGTCATCCGTTTGCTTGAAGCAGCTGGCTTTTGACATCCTGGAGCTGCTTCTGACGTCGGCATTTCCAGAGCTTGATGATATTTTCAAGCAGCTGCACGAGGAAAAGCATAAATTTGGTGAGTTCAGAACACAGTAA 3435 0.4105 MNMPPKPNQVVVRDLVEEAKKRIVILVVCVVGISYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKAAAYNNKAGSINVQSSKKPVENPKVIAKFEWKTKVNSPVVEDAIDQFTRHLISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLVNVICTHLELFRAAHSKIGKHHTGPLTIESRDMELKIVLAAENKLHPALFSAEAEHKVLQHLMTGLMHATFKSEDLQCSFFRYTVRELLACAVIRPVLNLANPRFLNERIESVVVNKTKVNKGVTAAQEASHTKEDELQASSHDFTKTSDPSVTGVELMQLKNGQSRNVETSAKQNACDNAIKDPLLSVSVDTRSSRTWSSLSANPETNGVQSIQQHRSGGEWGDILDVISRRKTQALAPEHFENVWTKGKNYKKKDGENQSNEHATQHPVVGKLPKVDHMKAISGPKQRDNNSKLIPQKGHHINSGHSSQLSVENTSIHVDKNGSSSVTSCKDDESVTSYKDDENIHIYGQISDSESSTSYTSEDDESSTVTGLDSPVTKVWDGRSNRKQAVSHVHHPLENFDNHSAKKRSKSHSRYSRLSRAQSGNKRSWSGVHKMQTWQEVERTSFLSGDGQDILNASKSHVDSESSDDGDIESLGRLYSGAAASSSAHSISKTESSSLPFTPLKSSSGVDSFYKLRCEVLGANIVKSGSKTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFSEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLMQLPTVSESIEVWDFLSVDSQTYIFSNSFSIMETLSAGLDAKPFEKTKNTAHFSAPTSDPVSFRRENCSAESKESVMKGKNNVEADALRSKVNNMPLSLPKKNTHQPIKSFDNSRGNTDILAQKSAPSPNNSQKPVKGRDSSDEVCEVHRDTSDAFPTEWVPPNLSVPILDLVDVILQVQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIASGVKRVEQILWPDGIFITKHPNRRPPPPPPRNPSQSSPRGNQTTEVSSPILEDEQTREADRRAKFVYELMIDHAPPAIVGLVGRKEYEQSARDLYFFLQSSVCLKQLAFDILELLLTSAFPELDDIFKQLHEEKHKFGEFRTQ* 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0147 1144 MobiDBLite consensus disorder prediction 1022 1036 - -
Vra9g0147 1144 ProSiteProfiles PXA domain profile. 107 286 IPR003114 -
Vra9g0147 1144 PANTHER PX SERINE/THREONINE KINASE PXK 8 1141 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 591 609 - -
Vra9g0147 1144 SMART PX_2 693 797 IPR001683 GO:0035091
Vra9g0147 1144 MobiDBLite consensus disorder prediction 844 858 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 560 581 - -
Vra9g0147 1144 CDD PX_SNX19_like_plant 691 795 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 298 323 - -
Vra9g0147 1144 SUPERFAMILY PX domain 690 798 IPR036871 GO:0035091
Vra9g0147 1144 MobiDBLite consensus disorder prediction 421 435 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 301 315 - -
Vra9g0147 1144 Gene3D - 689 805 IPR036871 GO:0035091
Vra9g0147 1144 ProSiteProfiles PX domain profile. 689 801 IPR001683 GO:0035091
Vra9g0147 1144 MobiDBLite consensus disorder prediction 459 507 - -
Vra9g0147 1144 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 8 1141 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 371 390 - -
Vra9g0147 1144 Pfam PX domain 720 797 IPR001683 GO:0035091
Vra9g0147 1144 SMART PXA_3 111 290 IPR003114 -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 421 609 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 874 914 - -
Vra9g0147 1144 Pfam PXA domain 107 284 IPR003114 -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 828 843 - -
Vra9g0147 1144 Pfam Sorting nexin C terminal 962 1102 IPR013937 -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 1018 1058 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 1037 1051 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 828 922 - -
Vra9g0147 1144 MobiDBLite consensus disorder prediction 523 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0147 Vra-Chr9 980022 988098 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0147 K17925 - gmx:100790491 1910.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0147 9 980022 988098 Vra9g0147 9 980022 988098 ECH