Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0122 ATGGGTTCAGAACACACTCTAAAGCTTCCAGTAATCGATTTCACTGACCTGAAACTGGAAGCCAAAAGTCGTAATTGGGAGACGGTAAAATCACAAGTACACAAGGCACTAGTAGAGTATGGTTGTTTTGAAGCAATTTTTGATAGTGTTCCTTTAGACCTTAGAAAAGCCTTGTTTGGTTCAATTCAAGAACTCTTTGATCTTCCTCTAGAGACAAAGATGCTCAATGTGTCTAAGAAACCTTATCATGGTTATGTTGGGCAATATCCTATGGTTCCACTCTTTGAAAGTATGGGCATTGATGATGCAATTGTTCATGAGAAAGTAGAAAGCATGACCAACATCATGTGGCCTAATGGAAACCCAAGTTTTAGCAAAACTATACAATCCTTCTCTGGGCAGCTATCAGAGTTGGATCAGATTGTTAGGAAGATGGTTTTGGAGAGCTTGGGTCTTGAGAAGTACTTGGAGGAGCACATGAACTCAACCAATTATCTCCTCAGGGTTATGAAATACAAAGCCCCTCAAACCACTGACACAAAGCTAGGCCTCACCACACACTCAGATAAGAACACAGTTACCATTTTGTACCAAAATGGAGTGGAGGGTTTAGAGGTTTTGACCAAAGATGGAAAATGGATAAGCTACAAGCCTTCTCCTCACACTTTTGTTGTCATTATTGGTGACTCTCTCCATGCATGGTCAAATGGGAGGTTGCATTCACCCTTTCACAGAGTGATGATGAGTGGAAATGTGGCAAGATATTCTGCAGGGTTGTTCTCTATACCAAAAGGAGGGAGCATAATAAAAGCACCAGAGGAGCTGGTGGATGAGGAACACCCTCTGCTTTTTAAACCCTTTGATCATGTTGAGTTTCTCAAGTATTACTACACTGAACAAGGACAGAGAGACCAGTTTGCACTGCGCACTTACTGTGGTGTCTGA 945 0.4169 MGSEHTLKLPVIDFTDLKLEAKSRNWETVKSQVHKALVEYGCFEAIFDSVPLDLRKALFGSIQELFDLPLETKMLNVSKKPYHGYVGQYPMVPLFESMGIDDAIVHEKVESMTNIMWPNGNPSFSKTIQSFSGQLSELDQIVRKMVLESLGLEKYLEEHMNSTNYLLRVMKYKAPQTTDTKLGLTTHSDKNTVTILYQNGVEGLEVLTKDGKWISYKPSPHTFVVIIGDSLHAWSNGRLHSPFHRVMMSGNVARYSAGLFSIPKGGSIIKAPEELVDEEHPLLFKPFDHVEFLKYYYTEQGQRDQFALRTYCGV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0122 314 Gene3D - 7 311 IPR027443 -
Vra9g0122 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 4 313 - -
Vra9g0122 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 263 IPR005123 -
Vra9g0122 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 313 - -
Vra9g0122 314 SUPERFAMILY Clavaminate synthase-like 6 300 - -
Vra9g0122 314 Pfam 2OG-Fe(II) oxygenase superfamily 158 260 IPR044861 -
Vra9g0122 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0122 Vra-Chr9 768443 769879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0122 7 297 Glycosyltransferase AT5G59530 24.585 1.42e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0122 - - gmx:100784444 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0122 9 768443 769879 Vra9g0122 9 768443 769879 ECH