Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0121 ATGATGATTTCCCAAAACATTTGTCAGGTTCCTGTAGTAGACTTCACTGATAAGGAGATGAAACCAGGTACAACGAAGTGGGTTTCAGCATGCAAAGTGATCCGAAATGCACTTGAAGATCATGGTTGTTTTTATGCGTTGTATGATAAAGTTCCTATTGAGCTTTACAACTCAGTTTTTACTCTAATGGAAGAACAATTTGATCTTCCATTGGAAACAAAAATGCAAAAGATCAGTGACAAACCCTACCATGGTTACTATGGACAAAATGCTCATGTCCCTCTGTATGAATCCCTAGGGATCAACGACCCATTAAGCACAGAAGAAATTCAGAAGTTCACCAAGCTAATGTGGCCAGCAGGATATGATCATTTCTGTGAGACTATGAGTCTGTATGCAAAGCTGGTTGTAGAATTGGATCATATGAGTAAAAGAATGGTGTTTGATGGGTATGGAGTTGATCAAAAGCACTGCGATTCTCTTCTGGAATCAACAAAGTACATGCTTCGGAGCTTCAAATATAGAGTGCCACAGAAGCATGAAAATAATCTGGGATTGCATCCTCACACAGACACATCATTCTTTACCATTTTGCATCAGAACAATGTAAATGGTCTGCAAGTAAAACTCAAAAATGGTGACTGGATTCACATTGATCCCTCACCCTTCATGTTTCTCATCCTTGCAGGCGATGCATTTAAGGTTTGGAGTAATGATAGAATGCAGTGTTGTGAACACCGAGTGATTATAAGTGGAGAGAAGGAAAGGTATTCGATGGGATTGTTTTCACTTGGAGGCAAGGTGGTTGAAACACAAGAAGAACTTGTTGATGAAGAACATCCAAGACAATATAAGCCATTTGATCATTATGAATACCTGCGTTTCTATGCAACAAAGAAGGCCCTTGAATCCAAGTCTCGAATCAAAGCATTCTGCGGCATAGACTATGCTGATGAGAACTGA 963 0.3956 MMISQNICQVPVVDFTDKEMKPGTTKWVSACKVIRNALEDHGCFYALYDKVPIELYNSVFTLMEEQFDLPLETKMQKISDKPYHGYYGQNAHVPLYESLGINDPLSTEEIQKFTKLMWPAGYDHFCETMSLYAKLVVELDHMSKRMVFDGYGVDQKHCDSLLESTKYMLRSFKYRVPQKHENNLGLHPHTDTSFFTILHQNNVNGLQVKLKNGDWIHIDPSPFMFLILAGDAFKVWSNDRMQCCEHRVIISGEKERYSMGLFSLGGKVVETQEELVDEEHPRQYKPFDHYEYLRFYATKKALESKSRIKAFCGIDYADEN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0121 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 266 IPR005123 -
Vra9g0121 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 89 IPR026992 -
Vra9g0121 320 Gene3D - 8 317 IPR027443 -
Vra9g0121 320 Pfam 2OG-Fe(II) oxygenase superfamily 177 262 IPR044861 -
Vra9g0121 320 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 6 313 - -
Vra9g0121 320 SUPERFAMILY Clavaminate synthase-like 3 299 - -
Vra9g0121 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0121 Vra-Chr9 762190 763475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0121 9 311 Glycosyltransferase AT5G59530 23.913 1.27e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0121 - - gmx:100794707 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0121 9 762190 763475 Vra9g0121 9 762190 763475 ECH