Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0109 ATGGTGAAGGGCGAATCAAAGAAACATGTTCTCACTGCTTTCACTCCTAATGGGGACTATGCTGCTATTATGTCTGCCAATGGGACGGCCAAAATTTGGAACACAAGCACTGGACATTTGTTAGCAGAGTGGAAGCCATCAGATGAAGATAATGATCCTCGTTATTCTTGCATTGCATCTAGTTACACAGGAAAAAAGTTTAGAAAAGAACAGGGAACTTTCTTATTAGCTCTTGGCACAATCGATGGAAGAGTTCTTGCCATTGATGTTTCCACTGGTGACAGAAAGTTGATTACCAGCTATCCCGGGGAGATCTGTGGACTCTCCTTTGCAAATAAAGGTCATGTTCTTCGCATTGTTGGACGTAATGGGATGGCATATGAGGTTAATACAGAAACAGGACAGCTTTTAAAGGAATTTAAAGTCTCAAAAAAGTCTATCACTTCTCTGGCTTTCTCACATGATGAAAAATATTTAGCTATTGTCAGCTCTAAAATACGGGTTATTAGCTGGGAAATTGGGAAAGAGGTTCTAAAGTTCCCCAATGATTTGGGAAATGTACAACACATTTCTATATCCAATGATGCCAAAAGTTTAGTTACATTTGATTTTGAGGGTAAACACCTTCATGTTTGGAAATGTGATTTAAATTCAGGAAATGTGGGTAGAGGTCCTACACTTCCCCTAAGGCATCCTCCAGTAGCTTTGGATTGCCGCCGTGGTTGCAATAAAGAAGAAGATATCGTTCTTTTGGCAGTTAGTAGCAGAGGTTCTGCTTATATTTGGAATTTTAATGCTTTCTCCGAAGATCAGATGCAACCAACTAAATTAACCACCAAGACCAAAACAGTTGAAACAGACAAGGAAAATGGGGGAAGTTCAAAGAAAAGGCACACCTCAATTATTGCATCCAGATTACAACCTATAGCGGAAGACAAACAGGTTAAAGCTATTGTGACTTATGGCTCTCTGGATCATCCTCAGTTTAGCTTCGTAAATATTAGCAATTCAGGGGAGACTATAGTATTAAATGTAGAAGATGAGACCGATTCTGTTCATCAGCATGGTAGTCCTTCTGAAATATCAATGGAAAGCAAGAAAACTAAGAAAAGACAAGCACCATCTGATCCTGATGTTACAACTGACGTGGTGGATTTAGATCAACATGAGGCTGCAGAAGGAGTTCTCCTTAATAATGATTTGGATGAGCCAACAATGGGAGAGAAACTTGCTAGTCTAAGTTTACTGGAAGAGAACAAATTCAGGAGTGACAAAGAGCAAGAAGCTGCTGTCTCAGTAAAGCCTCCAAGTGCAGACTCCGTACATGTTTTGATTAAGCAAGCATTAAACGCTGACGATCGCACCCTTTTGCTAGATTGCTTGTATACGCAAGATGAGAAGGTTATTAGAAAGTCAATTGCTCAGTTGAACCCATCCAACGTCCTCAAACTTCTATGCTCCCTCATATCCATTATTGAATCTAGAGGTGCAATCTTGGCTTGTGCGCTTCCGTGGTTGAAGTATCTACTTCTACAGCATGCGAGCGGAATATTGTCCCAGGAATCTTCATTAAAAGCTTTGAACTCTTTGTATCAACTGATTGAGTCTAGAGTCTCCACTTTTAAATCTGCCATCCAACTCTCAAGTTGCTTAGACATTCTTTACTCAGGGGTTATTGTTGAGGAGGACGATGAAGATGAAATAGTGCCAGTTATCTTTGAGGATAAGGATAGTAGTGAAGAAGAATCTGATGAAGAGACCATGGAAACTGGCCAAGATATCACAGATGATGAAGAAGAATCAGAACAAGAACTTGAAGGTGCAAGTGATATGATGGAAGATTGA 1845 0.4 MVKGESKKHVLTAFTPNGDYAAIMSANGTAKIWNTSTGHLLAEWKPSDEDNDPRYSCIASSYTGKKFRKEQGTFLLALGTIDGRVLAIDVSTGDRKLITSYPGEICGLSFANKGHVLRIVGRNGMAYEVNTETGQLLKEFKVSKKSITSLAFSHDEKYLAIVSSKIRVISWEIGKEVLKFPNDLGNVQHISISNDAKSLVTFDFEGKHLHVWKCDLNSGNVGRGPTLPLRHPPVALDCRRGCNKEEDIVLLAVSSRGSAYIWNFNAFSEDQMQPTKLTTKTKTVETDKENGGSSKKRHTSIIASRLQPIAEDKQVKAIVTYGSLDHPQFSFVNISNSGETIVLNVEDETDSVHQHGSPSEISMESKKTKKRQAPSDPDVTTDVVDLDQHEAAEGVLLNNDLDEPTMGEKLASLSLLEENKFRSDKEQEAAVSVKPPSADSVHVLIKQALNADDRTLLLDCLYTQDEKVIRKSIAQLNPSNVLKLLCSLISIIESRGAILACALPWLKYLLLQHASGILSQESSLKALNSLYQLIESRVSTFKSAIQLSSCLDILYSGVIVEEDDEDEIVPVIFEDKDSSEEESDEETMETGQDITDDEEESEQELEGASDMMED* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0109 614 MobiDBLite consensus disorder prediction 280 299 - -
Vra9g0109 614 SUPERFAMILY WD40 repeat-like 13 266 IPR036322 GO:0005515
Vra9g0109 614 MobiDBLite consensus disorder prediction 349 381 - -
Vra9g0109 614 Pfam Dip2/Utp12 Family 453 554 IPR007148 -
Vra9g0109 614 PANTHER OS01G0649000 PROTEIN 72 611 - -
Vra9g0109 614 MobiDBLite consensus disorder prediction 572 614 - -
Vra9g0109 614 PANTHER WD REPEAT-CONTAINING 72 611 - -
Vra9g0109 614 MobiDBLite consensus disorder prediction 281 295 - -
Vra9g0109 614 SMART WD40_4 133 170 IPR001680 GO:0005515
Vra9g0109 614 SMART WD40_4 4 34 IPR001680 GO:0005515
Vra9g0109 614 SMART WD40_4 173 213 IPR001680 GO:0005515
Vra9g0109 614 Gene3D - 3 304 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0109 K14546 - gmx:100792757 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0109 9 671709 677458 Vra9g0109 9 671709 677458 ECH