Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0099 ATGTTCGTTTTCTCTGTAAAACCTTTCTTCAGCATCCTCCTCGTCTCGCTCTCAGTCTTCTTCTTTCTCGTACTGCTATCGCCTCGTTCCCTTTTCTCCCAAAATCCCATTTCTGGTGGGGAGGTGGTGGATATATGGAATGTTCGGAGACTCGTGGAATGGAGACCTTGCAATTGGTGGCTACAAGGACATCAAGCAGCTCTACCACTAGAAACCAATGGATATATCAGAGTGGATTGCTATGGGGGCCTCAATCAGATGCGAAGAGATTTCTGTGATGGTGTGGGCATTGCACGTTTGTTAAATGCAACTCTCGTCTTGCCAAAGTTTGAAGTGGCGTCATATTGGAATGAAACAAGTGGTTTTGCCGATGTATATGATGTAGACTACTTCATACAGCATATGAATGGCTTTGTCAAAGTTGTGAAAGAGTTACCACCAGAGGTTGCATCTAAAGAACCTGTTCATGTGGACTGTAGCAAACGGAAAGGGCAATTTGATTACGTTGAAAGTGTTCTTCCATCTTTGTTAGAACACAAGTACATTTCAATCACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTCTGTATGCAAAAGCTGCTCTGTGTCAAGCTTGTTACAAAGCATTGCGTCTTTCGAGATCCTTGGAAAGGAAAGCCTCTGAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCTCTTCATCTTCGTTTTGAGCCTGATATGGTTGCATACAGCCAGTGCGAGTACAGGGGTCTTTCTCCTGCTTCCATGAAAGCCATAGAGGAAGCACAAGTGGACAGAAAACCATGGACTGGAGACTTAGCTCGCATTTGGAGACTACGTGGAAAATGTCCACTTACACCTAACGAGACAGCTTTAGTACTTGAATCTCTTTCCATCCCACCAACTACAAATATATACCTAGCAGCAGGAGATGGTTTGATGGAAATTGAAGGATTGACAGAAACCTATGCCAACATATTTACTAAGTCAAGTCTTCTTAGTAGGGAAGACTTCACAAACATGCATGGCAATACAAAAGCTGCTTTGGATTATTATATATCCATTAACAGTGATTCTTACGTAGCTACATATTTTGGGAACATGGACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGTTTGTACAAGACTCTATTTTTGAGCAGAAGAGGTTTTGCAGAATTAACCTCAAAGGGTCTTACGGGAAAGGAGTTGATGGCAGCACTATGGAAGGTTCACAGAGATGATTTTGCTATGGGAAGAGGCTCTGCTCTGCCAGAGTGTTTTTGCGAATTTAAGTTCTGA 1314 0.4269 MFVFSVKPFFSILLVSLSVFFFLVLLSPRSLFSQNPISGGEVVDIWNVRRLVEWRPCNWWLQGHQAALPLETNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDVDYFIQHMNGFVKVVKELPPEVASKEPVHVDCSKRKGQFDYVESVLPSLLEHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLSRSLERKASELLDAIPKPFLSLHLRFEPDMVAYSQCEYRGLSPASMKAIEEAQVDRKPWTGDLARIWRLRGKCPLTPNETALVLESLSIPPTTNIYLAAGDGLMEIEGLTETYANIFTKSSLLSREDFTNMHGNTKAALDYYISINSDSYVATYFGNMDKMVAAMRAFKGLYKTLFLSRRGFAELTSKGLTGKELMAALWKVHRDDFAMGRGSALPECFCEFKF* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0099 437 PANTHER O-FUCOSYLTRANSFERASE 13 4 436 - -
Vra9g0099 437 Pfam GDP-fucose protein O-fucosyltransferase 75 381 IPR019378 -
Vra9g0099 437 CDD O-FucT_plant 75 387 IPR024709 -
Vra9g0099 437 PIRSF UCP009360 4 436 IPR024709 -
Vra9g0099 437 PANTHER OS02G0726500 PROTEIN-RELATED 4 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0099 Vra-Chr9 626763 629551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0099 69 407 Miscellaneous Gene Families AT1G22460 35.043 3.89e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0099 - - gmx:100801207 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0099 9 626763 629551 Vra9g0099 9 626763 629551 ECH