Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0092 ATGGCTTTGGCACGTTTGGCTTTGAAAGATTTGCGAGGAAGGTTGTTTGCTTCATCTTCCTTCAGCAGCCATAGTTCTGGTGGCTTGCACAAGCAGAGATGGAACAATGAATTGCTCAAAAGGTTTGCCACTGCAGCAGGTGATAAAGGAAAATCTGAAGCCACTGAAGTTGCTGTCACTGAAGGGAAAAAGTCTAACAGGTTGTTCCCCAGAAGGAGGAACAGAAGATGGATTTGGAGAAACCATGATCGTGAATTCCCTCCAGCTCTCTATGAGTTCTTTCCTTCAGGGCTTGGGAATGCACTGATGCAGGCAAGTGAGAACATCAACAGGGTTTTTGAGAACATGAATCTGACACCTTGGTCTCTGAGTGGTCGTGTGAAAGAGAGAGACGATCATTACAAACTGAGGTATGAGATGCCAGGAATGACAAAAGAGGAGGTGAAGATCACCATTGATGATGGGGTGTTGACAATAAAGGGAGAGCACAAGGAAGAGAAAGAAGAAGGAGAAGATGATGAGTATTGGTCATCAAGTAGCTATGGATACTATAACACAAGCCTGGTTTTGCCTGATGATGCTAAGGCTGATGACATTAAAGCAGAGTTGAAGGATGGTGTCTTAATTGTCACCATTCCTAGGACTGAGAAACCCAAAAAGGATGTGAAACAAGTCACAGTAGAATGA 687 0.4396 MALARLALKDLRGRLFASSSFSSHSSGGLHKQRWNNELLKRFATAAGDKGKSEATEVAVTEGKKSNRLFPRRRNRRWIWRNHDREFPPALYEFFPSGLGNALMQASENINRVFENMNLTPWSLSGRVKERDDHYKLRYEMPGMTKEEVKITIDDGVLTIKGEHKEEKEEGEDDEYWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLIVTIPRTEKPKKDVKQVTVE* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0092 228 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 228 IPR002068 -
Vra9g0092 228 Gene3D - 89 228 IPR008978 -
Vra9g0092 228 Pfam Hsp20/alpha crystallin family 127 227 IPR002068 -
Vra9g0092 228 CDD ACD_sHsps-like 127 214 - -
Vra9g0092 228 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 54 228 - -
Vra9g0092 228 SUPERFAMILY HSP20-like chaperones 113 227 IPR008978 -
Vra9g0092 228 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 54 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0092 Vra-Chr9 584922 585972 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0092 K13993 - gmx:100787482 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0092 9 584922 585972 Vra9g0092 9 584922 585972 ECH