Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0089 ATGTTACTTAGAAGTTCCTCTGCACCAATTCTAACTTCATTGGTACTCTATTCCAGAGACTCCTCCACTGAACCAGAAAACATTTTTCGGCTACCTAAAACAACATCAGCTTTAAGTCTAAACCAAATACTGGTAGAGATAGACCTTAAAAACTCAAGTCCTAAGAGAAAAAACCGTGTGCAACTTGGTAATAGTGTTCCCAAAAATCAACAGAGTGTAAAAATCAAAGAAAGAGATGAAGTGAAAAGTCCTCAACAAAAGACTTACATGAAATCACAACCTTCCATTCAAGAACTGTTTTCAAGTTTGGATTTAGATAAGGGAATAATGGATCATGAAGAAGAGTGTTGTGGGGGGAAGAAAGATGGTATCTTGCAGACTTCGGTGATGGGTGGTGGAATGGGGAGTGATGGTGGTTGGAATAATGGTAGTGGAAAAGGCTCGAATGGTGGACATGGAAGAGGGTGGAATTTCCATGAAGGAAATGATCGTGGTAGAGATAGGACAGATGCTTATTACCAGAACATGATTGAAGCAAACCCCGGTGATGCTCTTTTGCTGGGAAATTATGCAAAGTTTTTGAAAGAGGTTTGTGAAGACTATCCTAAGGCAAAAGAGTATCTCGAAAGGGCTATTTTGGCTAATCCTGATGATGGTCTTGTTCTCTCCCTCTATGCCGACTTAATATGGCAAACAGAGAAAGATGCTGATCGAGCTGAAGGATATTTTGATCAAGCCATTAGAAGTGCCCCAGATGATTGCCATGTCGTAGCTTCATATGCTAACTTCCTTTGGGATGCTGAAGAGGAGGAAGATAAAGACTGCCAAAGTAAATCAGATGAAAATCATTCATATCCAACTGATCTCTTTCATGGAAGTAACCATCACCTTCATATAACTGAAGCCTCAAAAGCTTTACCACTGTTTCTCAAATGA 936 0.3985 MLLRSSSAPILTSLVLYSRDSSTEPENIFRLPKTTSALSLNQILVEIDLKNSSPKRKNRVQLGNSVPKNQQSVKIKERDEVKSPQQKTYMKSQPSIQELFSSLDLDKGIMDHEEECCGGKKDGILQTSVMGGGMGSDGGWNNGSGKGSNGGHGRGWNFHEGNDRGRDRTDAYYQNMIEANPGDALLLGNYAKFLKEVCEDYPKAKEYLERAILANPDDGLVLSLYADLIWQTEKDADRAEGYFDQAIRSAPDDCHVVASYANFLWDAEEEEDKDCQSKSDENHSYPTDLFHGSNHHLHITEASKALPLFLK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0089 311 MobiDBLite consensus disorder prediction 56 71 - -
Vra9g0089 311 MobiDBLite consensus disorder prediction 54 93 - -
Vra9g0089 311 SUPERFAMILY TPR-like 171 269 IPR011990 GO:0005515
Vra9g0089 311 PANTHER TPR REPEAT PROTEIN 1 299 - -
Vra9g0089 311 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 299 - -
Vra9g0089 311 Gene3D Tetratricopeptide repeat domain 156 276 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0089 Vra-Chr9 574944 577657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0089 - - var:108320683 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0089 9 574944 577657 Vra9g0089 9 574944 577657 ECH