Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0088 ATGGAGAGCGAGCCGCAGAGTGCAGGAAAAGATGAGGTTTTATCGGTTGAGCTATCAGCCCCTTCTGCTTGGAAGAAACTGTTCTTCCCTAAGAAAGTAGGAACACCAAGGAAAAGTGAGATTGTATTCGTAGCTCCTACTGGGGAAGAGATCACTTCCAAAAAGCAGTTGGAGCAGTACCTGAAGGCACATCCTGGGAATCCTGCCATCTCGGAGTTTGACTGGGGAACCGGTGAGACCCCTCGACGATCGGCACGGATTAGCGAGAAGGTCAAATCGACCCCACCGGCGGAGACCGAGCCACCAAGGAAAAGATCCCGGAAATCGTCAGGTTCTTCAAAGAAGGATAGCAAAGAAAACGAACCCGCCACTGAAGAATCGAAACCAGATCCTGATGAAACTGATAACAACAACAAAAAAATGACTGATACAGAGGAGATTGATAACAGTAATGCTGAAGTGCAAAATGCAACAGCTGAAAAACCTGAGGGAGGAGAAGAAGCATTGTTGGTAGAGTCAGAGGAGAAAATTGCAGGGGAAGCTTTGAATACTGAGGAGGAGGTAACTGAAAAACCCCAAGAGAAGGAGGATGTGACTGAGAAACCTGAGGAGCAGGAGGGCACTGAAAAACCCCAAGAAGTGGATGAGGCAGGAACTGCATCAGGAAAAGAAAATGGGAAAGTTGATGACAGTAAGCAAGACATAGCAGATAGTGTGATTCCTGATGCGAATGGAGGTGCTGAGAAAGTGAAGCTGAACGAAGATGTTGAGGAAAAGAACGGTACAACAGAAATCCCTGTAAGTGATGGAAAGAACAGCATTCAAGCTGAGGAGCAAGTAAATAAAATGGTTGACAACGGACAAGTTATTTGGAGCTGTGCTCAGTGA 888 0.4651 MESEPQSAGKDEVLSVELSAPSAWKKLFFPKKVGTPRKSEIVFVAPTGEEITSKKQLEQYLKAHPGNPAISEFDWGTGETPRRSARISEKVKSTPPAETEPPRKRSRKSSGSSKKDSKENEPATEESKPDPDETDNNNKKMTDTEEIDNSNAEVQNATAEKPEGGEEALLVESEEKIAGEALNTEEEVTEKPQEKEDVTEKPEEQEGTEKPQEVDEAGTASGKENGKVDDSKQDIADSVIPDANGGAEKVKLNEDVEEKNGTTEIPVSDGKNSIQAEEQVNKMVDNGQVIWSCAQ* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0088 295 Pfam Methyl-CpG binding domain 18 79 IPR001739 GO:0003677
Vra9g0088 295 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Vra9g0088 295 Gene3D - 12 85 - -
Vra9g0088 295 SUPERFAMILY DNA-binding domain 9 104 IPR016177 GO:0003677
Vra9g0088 295 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11 9 262 - -
Vra9g0088 295 MobiDBLite consensus disorder prediction 165 236 - -
Vra9g0088 295 MobiDBLite consensus disorder prediction 96 147 - -
Vra9g0088 295 MobiDBLite consensus disorder prediction 248 264 - -
Vra9g0088 295 MobiDBLite consensus disorder prediction 62 272 - -
Vra9g0088 295 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 9 262 IPR039622 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0088 Vra-Chr9 568661 571488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0088 - - pvu:PHAVU_010G155700g 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0088 9 568661 571488 Vra9g0088 9 568661 571488 ECH