Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0087 ATGTTCTCTTACTCAACTTCCTTCTTTCTTTGCCTTATCTTCTTCTCTGTAACACTTTCTCACGTTTTGGGGGATAAAGTATTTACTGGAACGTATGGAGTGAACTATGGAAGGATTGCAGACAATCTACCTTCTCCTCAGAGTGTGGTTACTCTTCTGAAAGCTGCAAAGATTAGGAACATCAGAATATATGATGCTGATCATCAAGTTCTGAGTGCCTTCAAAGGGTCAGGGATTGGAATTATCATTGGGCTACCAAATGAGTTTCTGAGAGACATAAGTCAGGGAGAGGATCGTGCCATGAACTGGATCAAAGAAAATGTGCAGCCATTTCTTCCAGGAACCAGAATTCGTGGCATTGCAGTAGGGAATGAAATACTAGGAGGAGGAGACATGGAGCTGTGGGAAGTTTTGCTGCCAGCAGCTAAAAATGTTTACACTGCACTTGCTAGGCTCAATCTGCAACATCAAATTCAGGTGTCAAGTCCACATTCCGAGGCTGTCTTCGCAAACTCCTACCCTCCATCTGCATGCACTTTCAGGGACGATGTGCTTCCTTTCATGAAACCCCTTTTGCAATTCTTCTCACAAATCGGCACTCCTTTCTACATAAACGCATACCCCTTCTTGGCCTACAAGAATGACCCTCAACACATTGACATAAACTACGCTCTCTTTAAGAAAAATCCAGGAATTTACGATGCCAAGACTAAACTGCACTACGACAACATGTTCATGGCTCAAATCGATGCAGCTTACGCAGCCTTGGAGAAGGTTGGCTTCGACAAGATGGAAGTCATTGTTTCCGAGACCGGTTGGGCCTCTCGTGGTGATGACAATGAAGCTGGTGCAACAGTAAAAAATGCAAAGACTTACAACAAAAACTTGAAGAAGCTGCTGATGAAGAAAAAGGGCACCCCTTACAGGCCTAAGATGGTTGTGAGAGCTTATATTTTTGCTTTGTTTAACGAGAATTTGAAGCCTGGTCCAACATCTGAGAGAAACTTTGGATTGTTCAAACCAGATGGCAGCATTGCTTATGATATAGGTTTCACAGGACTCACTTCATCAGCAATTTCCTTCAAGGGTGTTGGATCTTTGTATGTAATGGTTTCTGCAAGCTGTGCGGCTTTTCTTCTTCTTGTAGCATTATAA 1155 0.4294 MFSYSTSFFLCLIFFSVTLSHVLGDKVFTGTYGVNYGRIADNLPSPQSVVTLLKAAKIRNIRIYDADHQVLSAFKGSGIGIIIGLPNEFLRDISQGEDRAMNWIKENVQPFLPGTRIRGIAVGNEILGGGDMELWEVLLPAAKNVYTALARLNLQHQIQVSSPHSEAVFANSYPPSACTFRDDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFMAQIDAAYAALEKVGFDKMEVIVSETGWASRGDDNEAGATVKNAKTYNKNLKKLLMKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLTSSAISFKGVGSLYVMVSASCAAFLLLVAL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0087 384 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 8 361 - -
Vra9g0087 384 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
Vra9g0087 384 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
Vra9g0087 384 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 361 IPR044965 GO:0004553|GO:0005975
Vra9g0087 384 Gene3D Glycosidases 31 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0087 Vra-Chr9 565395 567442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0087 28 375 Glycoside Hydrolase AT3G15800 74.857 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0087 - - gmx:100789056 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0087 9 565395 567442 Vra9g0087 9 565395 567442 ECH