Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0084 ATGCTTGGTTTGGGTGCCGACCTCTTGTGGGCCGACATGAACCGTCTCCTTGCCTTCCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAGGATGAGACCTCCCCAAACTTCGTATCCGAGGTTGTCAACATCTATTTCCATGAATCAGAAAAGCTTCTCACCAATCTCAGAGCTTCGCTCATGGAGAGGGAGTTTTCGGATTATAAGAAAATGGGGAATCATTTGAATCAGTTCATGGGAAGTAGCTCGAGCATTGGCGCGAAGAGAGTTAGAAACGTTTGCGTTGCATTTCGTGCTGCTGCTGAGCAGAATAACCGTGCTGGCTGCTTGCGAGCGTTGGAGATGCTGGAGCATGAATACTGCTATCTCAAGAACAAATTGCATGAATTGTTTCAGATTGAGCAGCAACGTGCTTTGGCTGCAGGAGTTAGATACCCAGTGCAGGATTAG 471 0.4841 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLTNLRASLMEREFSDYKKMGNHLNQFMGSSSSIGAKRVRNVCVAFRAAAEQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQD* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0084 156 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Vra9g0084 156 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vra9g0084 156 Pfam Hpt domain 47 116 IPR008207 GO:0000160
Vra9g0084 156 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Vra9g0084 156 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Vra9g0084 156 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0084 Vra-Chr9 547257 548917 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0084 K14490 - gmx:100789608 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0084 9 547257 548917 Vra9g0084 9 547257 548917 ECH