Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0083 ATGGCTCTCATCACCACTCAACCTAAAAACCCCATTTTTAATGGCTGCACCACCCTTCACCGCTCAATCCCACGGCGGGATAATACTACTGTTCTTGGCCTTGGCTCCGTTAAAAACTTTAACTTTAACCGAAAAGAAAGCAAAATTTCCCTTAAAAGCAATCCCTTTACCTATAATTTGGCAGTGACAGCCAAAGCCAATGCAGGATTCGGAGAAGGTTTGGAGGCAGAGTCATTGAAACACAGAAAGATTTTGTTGTCTGAAGTTGAGGTGAAGAGAGAGAGAAGTGTTTTCTTTGGGAGAAAATGGAGCTCTTTGGATGTTGGCACTGCTGGGATTGTGTTGGCAATGCATGTGCTTTGCCTCTTTGCTCCATTCCATTTCAATTGGCCTGCATTTTGGGTGGCTGTGGCTCTCTATGTTGTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCACAGGAACCTTTCTCATAGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTCCTTTGCCTATTGTGGGGTTCTGGCACTTCAGGGGAACCCAATTGATTGGGTAAGCACACATAGATACCATCATCAGTTTTGTGACACTGAGAGAGACCCTCATAGCCCCACCGAAGGCTTCTGGTTCAGCCATATGAGTTGGCTCTTTGATACCAATTCTATCATAGAAAGGTGTGGAGAGCCAAACAATGTTGGTGATTTAGAGAAGCAACCTTTTTATAGATTTCTCCGAAGCACTTACCTTCTCCACCCTTTTGCTTTGGGAGCCCTTCTATATGCAGCTGGAGGATTTCCTTTCCTAGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTTTGGGGGAATCAGGCCTGGAATACCAGAGACCTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCTTTTGAGTATTCAGCTCGACATGGACTAGAATGGTGGCAACTAGACATGACTTGGTATGTTGTGAGATTTCTCCAAGCTATTGGGTTGGCCAGTGAAGTCAAGTTACCCTCAGAGACTCAGAAGCAGAGAATGGCATTCAATAATCATACAATAACCACATGA 1143 0.4453 MALITTQPKNPIFNGCTTLHRSIPRRDNTTVLGLGSVKNFNFNRKESKISLKSNPFTYNLAVTAKANAGFGEGLEAESLKHRKILLSEVEVKRERSVFFGRKWSSLDVGTAGIVLAMHVLCLFAPFHFNWPAFWVAVALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYSFAYCGVLALQGNPIDWVSTHRYHHQFCDTERDPHSPTEGFWFSHMSWLFDTNSIIERCGEPNNVGDLEKQPFYRFLRSTYLLHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAIGLASEVKLPSETQKQRMAFNNHTITT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0083 380 PANTHER BNAC05G37460D PROTEIN 45 375 - -
Vra9g0083 380 PANTHER ACYL-COA DESATURASE 45 375 IPR015876 GO:0016717
Vra9g0083 380 Pfam Fatty acid desaturase 130 349 IPR005804 GO:0006629
Vra9g0083 380 CDD Delta9-FADS-like 129 361 IPR015876 GO:0016717
Vra9g0083 380 PRINTS Fatty acid desaturase family 1 signature 153 173 IPR015876 GO:0016717
Vra9g0083 380 PRINTS Fatty acid desaturase family 1 signature 190 219 IPR015876 GO:0016717
Vra9g0083 380 PRINTS Fatty acid desaturase family 1 signature 275 296 IPR015876 GO:0016717
Vra9g0083 380 PRINTS Fatty acid desaturase family 1 signature 318 332 IPR015876 GO:0016717
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0083 1 375 Lipid Metabolism Gene Families AT3G15850 65.789 1.62e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0083 K20416 - gmx:100786391 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0083 9 541246 543472 Vra9g0083 9 541246 543472 ECH