Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0078 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCTTCTCCGCCACTCTCCAAGAGGCTCCGTTGTTCCTCTTCGCCGATTCGCTTCCCTCCCCTCTCTCTCATCGACCAACTTCGCCCGCTCTTTCCGCACATGGACGACCTGGTTCTTGAGAGGGCTCTTCAGGAATGTGGAAATGATATTGATGCTGCCATCAAGAGGCTGAACGAGCTTTGTTTGGGAAATACAGATGGAAATGAAAATTCGGAAGGATCGGATGGTGTTAATTTGGTTGGAGGTAAATTGGAAGACAATGGAATTGCTTCTGTTCCTGAGGACCAGCCCACTTTGAACAACCACCTTCCTGCAGATGGAGCAGAATGGATTGAATTTTTTGTTAGGGAAATGATGGTTGCTACTAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGAATGCTAGAAGTTCTAGAGAAATCAATCAGTGAAAGAGCAAGGGCTGAGGCAACTGATGCACTTCAAAAGGAAAATTTGATGCTGAAAGAGCAAATCGAAGCATTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCATGAACGATCTGCTGATTACGAGGTTAAGAACCAAGAGTTGCAGCATTTAAAGCAATTGGTGTCTCAATATCAGGAGCAGATTAGAACTCTCGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTACTGGGCATTTCCCACCTGATATCTTCTAA 780 0.4474 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPPLSLIDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGNTDGNENSEGSDGVNLVGGKLEDNGIASVPEDQPTLNNHLPADGAEWIEFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERSADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFTGHFPPDIF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0078 259 Pfam CUE domain 40 76 IPR003892 GO:0043130
Vra9g0078 259 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Vra9g0078 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Vra9g0078 259 Coils Coil 168 195 - -
Vra9g0078 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Vra9g0078 259 SUPERFAMILY UBA-like 40 83 IPR009060 GO:0005515
Vra9g0078 259 CDD CUE 39 74 - -
Vra9g0078 259 Gene3D - 39 80 - -
Vra9g0078 259 Coils Coil 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0078 Vra-Chr9 512259 516657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0078 - - gmx:100813137 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0078 9 512259 516657 Vra9g0078 9 512259 516657 ECH