Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0075 ATGGAGCTTGATGCTCATGTTACCCCCGATAATAATGATGTGATACCTTATTCAGGAACGCAAGCCAATAAGCGGATGAGAAAAAAGTCTATGGTGTGGGAATACTTCACAGTAGAAGCTGTTGGAGCTGGATGTACCAGGGCTTACTGTAACCAATGCAAAAAGTCATTTTCTTATATAACTGATTCAAAACTAGCTGGTACAAGCCATCTGAAACGACACATTTCGATGGGAATCTGTCAAGTACTACGGGAGAAAAACCAACAAATCTCATATCCCAAAACAGGTGGTTCTCAATATAATGCCAATACTCCCAAGAAACGGCCAAGAGAGAATTCTAGGTTTACTAATGGTATCTCATTTGATCAGGAGCGTTGCAACCATGATGTTGCCAAAATGATAATTTTACATGATTATCCTCTTCATATTGTGAAGCAACAGGGTTTCATTGATTTTCTGCGGATTCTTCAACCCCAGTTCAATCCATCATGTCTAAATTCTATTGAAAGGGATTGTATTGCTATTTACCTCAGGAAAAAGCAGAATATGTTGAATGTCATTAATGTGATTCCTGGACAAGTCAACTTGACATTGGAATTGTGGACTTCAAACCAGGCAATGGGCTATGTTTTTGTTCGAGGACACTTCATTGATAGTGATTGGAACTTGCATCGTCCTATTCTCAATGTCGTTACAGTACCATTTCCTGGTTCTGAAGATTCTTTAAATCAAACTTTAGTGACATGCTTATCCGATTGGCATTTGGAGGGTCGGCTGTTTACTCTTGCGCTTGATAAATCCTTTTCCAGTGAGAATGTGATAGAAAATCTGAGAGGCCTGCTCTCTGTTAAGAACCCTGCCATACTCAATGGTCAGTTGTTAAACCAGAATTGCTATGCTCGTGTGCTTAGTCGCCTTGCAGCTGATGCACTATGGGCTATGAGAGAAACTATTAGCAAGGTTCGCGATAGTGTAAAGCATGTGAAGTCTTCAGAAACCCATAAAGAGAAGTTTATTGACTTGAAGCAACATTTACAAGTACCTAGTATGGTGAATCTTTCAATTGATGACCCGTGTAAATGGGACACAACTTATCATATGCTTGTAGCTGCCTGTGAATTAAAGGAAATCTTCATCTGCCTTGATACCACTGATTCTGATTACAGAATGACTCTAACAATGGATGACTGGAAGCAGGTTGAAACTCTCTGCACATATTTGAAGTATTTGTATGATGCAGCCAAAATTCTGACACAGCAACCGTACCCAACTTCAAATTTATTTTTTGCTGAAGTATCAAAAATTCAGGTGGAGCTGACACAAGCAGTCTTCATCCAGGATCCTTTCATAAGAAGTTTAATTTTTCCTTTGCACGAGAGCTTTGACCAATATTGGAGAGAAAGCTGCATCATCTTGGCAATTGCTGTAGCTATGGACCCAAGGCATAAAATGAAACTTGTGGAATTTACCTTTGCCAAGACATTTGGTGAGAATGCTGGGGCCTGGATAAAGATAGTTGAGGATGGTCTTCGTGATCTATTCATTGAATATAGCACCCAAATGTTTCTTAAAGCAACAAATGATGATGATGGGGATGACATTATGATAAAAGAAACATGTCAAGAAGATTCTATTGACTGCTCTCTTTTTGTTGATGGTGATGGTCTTTCGGATTATGAATTTTATATATCTGATTTTACTGGTAACCCTCAATTTAAATCAGAATTGGAAGAGTATCTGGAAGAGCCTCTGCTGACCAGTGTAGAGGAATTTGATATTCTGAGCTGGTGGAGATTAAATGGATTGAACTACCCGACATTGTCTAGAATAGCATCTGATATTTTGTCTTTACCAGTTTCCACTCTGTCTGCAGATTCTGTTTTTGACACCCAGATTAGAAAAATGGATAGCTACCGTAGTTCTTTAAGCTCCCTCACTCTTGAAGCCCTTATTTGTGCCAAGGACTGGTTCCAGTCAGAATGA 1983 0.3918 MELDAHVTPDNNDVIPYSGTQANKRMRKKSMVWEYFTVEAVGAGCTRAYCNQCKKSFSYITDSKLAGTSHLKRHISMGICQVLREKNQQISYPKTGGSQYNANTPKKRPRENSRFTNGISFDQERCNHDVAKMIILHDYPLHIVKQQGFIDFLRILQPQFNPSCLNSIERDCIAIYLRKKQNMLNVINVIPGQVNLTLELWTSNQAMGYVFVRGHFIDSDWNLHRPILNVVTVPFPGSEDSLNQTLVTCLSDWHLEGRLFTLALDKSFSSENVIENLRGLLSVKNPAILNGQLLNQNCYARVLSRLAADALWAMRETISKVRDSVKHVKSSETHKEKFIDLKQHLQVPSMVNLSIDDPCKWDTTYHMLVAACELKEIFICLDTTDSDYRMTLTMDDWKQVETLCTYLKYLYDAAKILTQQPYPTSNLFFAEVSKIQVELTQAVFIQDPFIRSLIFPLHESFDQYWRESCIILAIAVAMDPRHKMKLVEFTFAKTFGENAGAWIKIVEDGLRDLFIEYSTQMFLKATNDDDGDDIMIKETCQEDSIDCSLFVDGDGLSDYEFYISDFTGNPQFKSELEEYLEEPLLTSVEEFDILSWWRLNGLNYPTLSRIASDILSLPVSTLSADSVFDTQIRKMDSYRSSLSSLTLEALICAKDWFQSE* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0075 660 Pfam Domain of unknown function (DUF4413) 419 517 IPR025525 GO:0003677
Vra9g0075 660 SUPERFAMILY Ribonuclease H-like 191 658 IPR012337 -
Vra9g0075 660 SUPERFAMILY beta-beta-alpha zinc fingers 30 85 IPR036236 -
Vra9g0075 660 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 15 659 - -
Vra9g0075 660 MobiDBLite consensus disorder prediction 92 106 - -
Vra9g0075 660 Pfam hAT family C-terminal dimerisation region 575 657 IPR008906 GO:0046983
Vra9g0075 660 ProSiteProfiles Zinc finger BED-type profile. 27 87 IPR003656 GO:0003677
Vra9g0075 660 MobiDBLite consensus disorder prediction 92 115 - -
Vra9g0075 660 PANTHER BED FINGER-RELATED 15 659 IPR045259 -
Vra9g0075 660 SMART bed5 27 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0075 Vra-Chr9 495959 500767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0075 - - gmx:106799409 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0075 9 495959 500767 Vra9g0075 9 495959 500767 ECH