Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0070 ATGTCGTCCGAGGATGTGTTCATTGGCGCCATCGACCAAGGTACGACCAGTAGCAGGTTCATAATCTACGACGGATCGAGTAAAGCAATCGGAATCCACCACGTGGAGTTCACGCAGTTCTACCCGCAACCCGGGTGGGTGGAGCATGACCCGATGGAGATCTTGGAGAGCGTGAAGGTGTGCGTGGCCAAAGCCGTCGACAAGGCCACCGCCGATGGCTTCAACGTCGACAAGGGACTCAAGGCCATCGGTCTCACCAATCAGAGAGAAACCGCTCTCGTCTGGAGCAAATCCACCGGTCTCCCTTTCTACAACGCCATCGTTTGGATGGATGCTCGTACTTCTTCCATTTGCAGGAGACTGGAAAATGAGTTATCCGGCGGTAGAAACCATTTTGTGGAGAGTTGTGGCTTGCCTATTAGCACATATTTCAGTGCAGTGAAATTACTGTGGCTGATAGAAAATGTGAAAGCTGTGAAAGAGGCTATAGAGAAAAAGGATGCGCTGTTTGGAACTATAGATACTTGGTTGATATGGAATTTAACTGGTGGGGTGAAGGGGGGATTGCATGTTACTGATGTTTCTAACGCATCTCGGACAATGTTCATGAATCTAAAAACCCTACAATGGGACGAAACTATATTAGAAACTCTTAAAATTCCTGCTGAAATTTTGCCTAAAATTGTTAGTAATTCTGAAGTTATAGGAGATATTGCGGCTGGATGGCCAATTACTGGTATCCCTATTGCTGGATGTTTAGGGGATCAACATGCTGCCATGTTAGGACAATCATGCCGTAAGGGGGAGGCTAAAAGCACTTATGGCACAGGTGCATTTATATTACTGAATACTGGTGAAGGGATAGTTAAATCAAAACACGGTCTTCTAACCACATTAGCCTACAAGCTTGGCCCAAATGCTCCAACCAATTATGCATTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTGCAGTGGCTTAGAGACGGTCTTGGCCTCATTTCCTCTGCTTCGGAGATAGAGGAACTGGCATCACAGGTTGAATCCACTGGTGGGATTTACTTTGTTCCTGCTTTTAGTGGTTTGTTTGCTCCATGGTGGCGTGATGATGCTCGTGGTGTTATTGTTGGAATGACAAGGATCACAAACAAAGCTCACATTGCTCGAGCTGTGCTTGAGAGCATGTGTTTCCAAGTGAAAGAGGTCTTGGATTCAATGCATAAAGATTCAACACTAGATTCCAAAGAGATATCTTTGCTTAGAGTGGATGGTGGTGCAACTGTTAACAACCTCTTGATGCAGATTCAGGCAGATTTGTTGGGAAGTTCAGTAGTTAGACCTGTTGACATAGAGACCACAGCACTTGGAGCAGCCTATGCTGCAGGGTTGGCTATTGGGGTTTGGAAAGAAGAACAGATTTTCAACCCCCAGGAAAAGATGAAGAATGCTAAAGTTTTCCGTCCCATAATGACTGAGGAAGTAAGGAAAAAGAAGTTTGAATCTTGGTGCAAAGCTGTTAGTAAAACTTTTGACTTAGCTGATCTTGCTCTTTGA 1554 0.453 MSSEDVFIGAIDQGTTSSRFIIYDGSSKAIGIHHVEFTQFYPQPGWVEHDPMEILESVKVCVAKAVDKATADGFNVDKGLKAIGLTNQRETALVWSKSTGLPFYNAIVWMDARTSSICRRLENELSGGRNHFVESCGLPISTYFSAVKLLWLIENVKAVKEAIEKKDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMFMNLKTLQWDETILETLKIPAEILPKIVSNSEVIGDIAAGWPITGIPIAGCLGDQHAAMLGQSCRKGEAKSTYGTGAFILLNTGEGIVKSKHGLLTTLAYKLGPNAPTNYALEGSVAIAGAAVQWLRDGLGLISSASEIEELASQVESTGGIYFVPAFSGLFAPWWRDDARGVIVGMTRITNKAHIARAVLESMCFQVKEVLDSMHKDSTLDSKEISLLRVDGGATVNNLLMQIQADLLGSSVVRPVDIETTALGAAYAAGLAIGVWKEEQIFNPQEKMKNAKVFRPIMTEEVRKKKFESWCKAVSKTFDLADLAL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0070 517 TIGRFAM glycerol_kin: glycerol kinase 7 510 IPR005999 GO:0004370|GO:0006072
Vra9g0070 517 PIRSF GlpK 5 516 IPR000577 GO:0005975|GO:0016301
Vra9g0070 517 PANTHER - 2 513 - -
Vra9g0070 517 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016773
Vra9g0070 517 PANTHER SUGAR KINASE 2 513 - -
Vra9g0070 517 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 373 393 IPR018483 GO:0005975|GO:0016773
Vra9g0070 517 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 464 IPR018485 GO:0005975|GO:0016773
Vra9g0070 517 SUPERFAMILY Actin-like ATPase domain 266 510 IPR043129 -
Vra9g0070 517 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Vra9g0070 517 Gene3D - 2 262 - -
Vra9g0070 517 Gene3D - 264 514 - -
Vra9g0070 517 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0070 K00864 - gmx:547750 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0070 9 454772 457481 Vra9g0070 9 454772 457481 ECH