Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0066 ATGTCTTCCTCCAACACTAACTCTCACTCTAAACCTCAACCTCAGGAAGGGAACATGGCATTGCAAACCCATTCTCCGTCTCACGCGCACAATAGCAACAAGCATGGGCACGGAGTCTTTGGAGATGTCTACACCATCACCAAGGACATGCACGCCGATCATCACAACCCTTCCTTTGATTTTCAATTTCGCCTTCCCCCGCTTCCGAATTTTCTGGGCTCTAGAGAGGCCCGCGAGTTTTTCAGCGGTGCCCTTGCAGGGGCAATGACAAAGGCGATACTTGCTCCTCTTGAGACCATTAGGACAAGAATGGTTGTTGGTGTTGGATCCAGAAATATTGCTGGCAGTTTCGTAGAGGTTATACAGCAGCAGGGATGGCAAGGATTGTGGGCTGGAAACATGATCAATATGCTTCGTATAGTTCCAACACAGGCTATTGAGCTGGCCACATTTGAGTGCGTCAAACGGGCTATGACATCCCTGCAAAACAAATGGGAAGAGGATGGCCACCCCAAGTTGCAGATAGGTTTCATCGATTTCAACCTGCCCATGTCTTGGATTTCACCAGTTGCTGTCGCTGGTGCCGCAGCAGGAATTGCTAGCACAATCGTATGCCATCCCCTCGAAGTTTTGAAGGACCGGCTAACCGTTAGTCCTGAAATCTACCCTACTTTAGGTATTGCGATCAGAAATATTTATAAAGATGGTGGTGTTGGCGCTTTTTATGCTGGTATCTCACCGACACTGGTCGGAATGCTTCCATACAGTACATGCTATTATTTCTTGTATGATACCATGAAGGATTCTTACTGCCAGACCAAAAATAAGAAAACTCTAAATCGTCCAGAGATGCTTTTGATTGGAGCTCTAGCAGGTTTTACTGCCAGTACAATTAGCTTCCCATTGGAGGTGGCTAGGAAGCGGCTGATGGTGGGCGCCTTGCAAGGTAAGTGCCCACCAAACATGGCAGCAGCACTTACGGAAGTAATTAGAGAAGAAGGTCTGAAAGGTTTGTACAGAGGATGGGGTGCAAGCTGTTTAAAGGTGATGCCATCCTCTGGTATCACCTGGATGTTTTATGAAGCATGGAAAGACATATTGCTTGTCCAGAATGGAAACCCATTTTAG 1128 0.4707 MSSSNTNSHSKPQPQEGNMALQTHSPSHAHNSNKHGHGVFGDVYTITKDMHADHHNPSFDFQFRLPPLPNFLGSREAREFFSGALAGAMTKAILAPLETIRTRMVVGVGSRNIAGSFVEVIQQQGWQGLWAGNMINMLRIVPTQAIELATFECVKRAMTSLQNKWEEDGHPKLQIGFIDFNLPMSWISPVAVAGAAAGIASTIVCHPLEVLKDRLTVSPEIYPTLGIAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCYYFLYDTMKDSYCQTKNKKTLNRPEMLLIGALAGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALTEVIREEGLKGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVQNGNPF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0066 375 SUPERFAMILY Mitochondrial carrier 78 361 IPR023395 -
Vra9g0066 375 MobiDBLite consensus disorder prediction 1 36 - -
Vra9g0066 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 185 269 IPR018108 -
Vra9g0066 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 157 IPR018108 -
Vra9g0066 375 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL1-RELATED 36 371 - -
Vra9g0066 375 Pfam Mitochondrial carrier protein 77 159 IPR018108 -
Vra9g0066 375 Pfam Mitochondrial carrier protein 283 368 IPR018108 -
Vra9g0066 375 Pfam Mitochondrial carrier protein 191 270 IPR018108 -
Vra9g0066 375 Gene3D Mitochondrial carrier domain 74 371 IPR023395 -
Vra9g0066 375 PRINTS Mitochondrial carrier protein signature 79 92 IPR002067 GO:0055085
Vra9g0066 375 PRINTS Mitochondrial carrier protein signature 92 106 IPR002067 GO:0055085
Vra9g0066 375 PRINTS Mitochondrial carrier protein signature 132 152 IPR002067 GO:0055085
Vra9g0066 375 PRINTS Mitochondrial carrier protein signature 242 260 IPR002067 GO:0055085
Vra9g0066 375 PRINTS Mitochondrial carrier protein signature 288 310 IPR002067 GO:0055085
Vra9g0066 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 279 366 IPR018108 -
Vra9g0066 375 PANTHER SOLUTE CARRIER FAMILY 25 36 371 - -
Vra9g0066 375 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0066 Vra-Chr9 416423 419352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0066 55 375 Organic Solute Cotransporters AT3G20240 73.209 1.25e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0066 - - gmx:100777341 630.943