Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0059 ATGAAGAAGAAGACGGTGGGGCAGCCGAAGTCCGGCGACGGTGACACCGTGCATTCACCGCTTGTCACTTATGCTTCCATGATTTCTCTTCTCACGCTCTGTCCTCCATTTGTCATTCTGCTGTGGTACACCATGACTGCTGCTGACGGATCTGTTTCTGAGACATGGAATTATTTGAAGCAGAATGGGGTACAGGGCTTCCTAGATATATGGCCTAGACCAACTGCTACGGCTTACAAAATCATTGTGGTCTATGGTTTATTTGAAGCAGCGCTTCAGCTCCTTCTGCCCGCCAAAACCGTTTACGGCCCAATTTCTCCAACCGGACATCAACCTGTCTACAAGGCAAACGGTGTGGCGGCGTATTTAGTCACCTTGATTACTTACATGGCCCTTTGGTGGTTTGGGATATTCAACCCAACAGTTGTTTATGATCATTTGGGAGAAATATATTCAGCACTCATCTTCGGGAGCTTTGTCTTCTGTATTTTGTTGTACATAAAAGGTCATTTGGCACCATCTTCAACAGATTCTGGCTCATCTGGAAACATAATCATTGATTTTTACTGGGGGATGGAACTCTATCCGCGCATTGGAAAATATTTTGACATAAAAGTTTTCACCAACTGCAGATTTGGAATGATGTCATGGGCAGTTCTTGCATTGACCTACTGTATAAAACAGTATGAAGAAAATGGAAAAGTATCCGACTCAATGCTTGTAAACACTGCATTAATGCTAATATATGTTACCAAGTTTTTCTGGTGGGAGGCTGGATATTGGAACACAATGGATATTGCACACGATCGAGCTGGATTTTATATTTGCTGGGGTTGCTTGGTGTGGGTTCCATCTGTGTATACATCTCCTGGAATGTACCTTGTCAACCATCCCGTAAATCTCGGCATTCAGCTAGCGATCTCAATTTTATTGGCTGGCATTCTTTGCATATTCATCAACTATGACTGTGACAGGCAAAGGCAAGAATTTCGTAGGACAAATGGAAAAAGCACTGTCTGGGGAAAAGCTCCGTCAAAGATAGAGGCCTCGTATACCACTACTACTGGGGAAACTAAAAGAAGTCTTCTTTTAACCTCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTGAAATACTGGCAGCTTTCTTCTGGACAGTCCCAGCTCTTTTTAATCATTTTTTGCCTTACTTCTACGTGATCTTTCTTACTATCCTTCTCTTTGATCGAGCAAAACGAGATGATGATCGATGCAGATCCAAGTATGGCAAGTACTGGAAACTATATTGCGACAAGGTACCCTACAGAATAATTCCAGGAATATACTGA 1335 0.4277 MKKKTVGQPKSGDGDTVHSPLVTYASMISLLTLCPPFVILLWYTMTAADGSVSETWNYLKQNGVQGFLDIWPRPTATAYKIIVVYGLFEAALQLLLPAKTVYGPISPTGHQPVYKANGVAAYLVTLITYMALWWFGIFNPTVVYDHLGEIYSALIFGSFVFCILLYIKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVSDSMLVNTALMLIYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGIQLAISILLAGILCIFINYDCDRQRQEFRRTNGKSTVWGKAPSKIEASYTTTTGETKRSLLLTSGWWGLSRHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKLYCDKVPYRIIPGIY* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0059 444 Pfam Ergosterol biosynthesis ERG4/ERG24 family 52 444 IPR001171 GO:0016020|GO:0016126|GO:0016628
Vra9g0059 444 ProSitePatterns Sterol reductase family signature 1. 182 197 IPR018083 GO:0016628
Vra9g0059 444 PANTHER 7-DEHYDROCHOLESTEROL REDUCTASE 16 444 - -
Vra9g0059 444 Gene3D - 235 443 - -
Vra9g0059 444 ProSitePatterns Sterol reductase family signature 2. 408 431 IPR018083 GO:0016628
Vra9g0059 444 PANTHER DELTA(14)-STEROL REDUCTASE 16 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0059 Vra-Chr9 383081 387993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0059 14 444 Miscellaneous Gene Families AT1G50430 83.295 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0059 K00213 - gmx:102659420 839.721