Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0053 ATGTCACGACAAACGGTGTACGTGCAGCAGTGTACGGGTGTCAATGGCCTCGAGAAAATCATTCTCAGAGAAGTTCGCGGTTTCTCTGCGGAGATTTATCTGTACGGTGGTCAAGTAACGTCATGGAAGAATGATCTTGGGGAGGAATTGCTCTTTGTCAGTAGTAAGTTTTCGAATCACGGCTCTCTTCAGCAACATGGATTTGCGAGGAACAGGTTTTGGTCATTAGATCCTAATCCTCCGCCGTTTCCCACAGCTACCACCAACAGAGCTTTCATTGACTTGATTCTTAGGCACTCTGAGGATGATGCAAAACATTGGCCACATAGATATGAGTTCCGGTTGAGGATAGCTTTGGGACCTGCCGGCGATCTGTTGATGACGTCTCGCATTCGAAACACAAATACTGATGGAAAATCCTTCACCTTCACATTTGCCTATAATACATACTTCTATGTTACTGACATCAGTGAAGTGCGAATTGAAGGATTGGAGACACTAGATTATCTGGACAACTTGAAGAATAGAGAACGATTTACTGAACAAGGGGATGCTATTACGTTTGAGTCTGAAGTGGACAAAGTTTACCTAAGCACTCCGACAAAAATCGCAATCATAGACCATGAAAGGAAGAGAACTTTTGTATTGCGAAAAGATGGGCTTCCAGATGCTGTGGTATGGAATCCATGGGACAAGAAAGCGAAATCCATATCTGATCTAGGGGATGATGAGTACAAAAATATGCTTTGTGTTCAAGCTGCTTGCGTAGAAAATCCAATTACCCTTAAACCTGGTGAAGAGTGGAAAGGAAGACAAGAGATATCTCCAGTTCCTTCAAGTTATTGTAGTGGTCAACTTGACCCACGAAAAGTACTTTTTACTTATTAG 888 0.4268 MSRQTVYVQQCTGVNGLEKIILREVRGFSAEIYLYGGQVTSWKNDLGEELLFVSSKFSNHGSLQQHGFARNRFWSLDPNPPPFPTATTNRAFIDLILRHSEDDAKHWPHRYEFRLRIALGPAGDLLMTSRIRNTNTDGKSFTFTFAYNTYFYVTDISEVRIEGLETLDYLDNLKNRERFTEQGDAITFESEVDKVYLSTPTKIAIIDHERKRTFVLRKDGLPDAVVWNPWDKKAKSISDLGDDEYKNMLCVQAACVENPITLKPGEEWKGRQEISPVPSSYCSGQLDPRKVLFTY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0053 295 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 56 291 - -
Vra9g0053 295 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 5 56 - -
Vra9g0053 295 PIRSF PHexose_mutarotase 6 63 IPR025532 -
Vra9g0053 295 PIRSF PHexose_mutarotase 56 282 IPR025532 -
Vra9g0053 295 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 56 291 - -
Vra9g0053 295 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 5 56 - -
Vra9g0053 295 Gene3D - 15 278 IPR014718 GO:0030246
Vra9g0053 295 Pfam Aldose 1-epimerase 59 274 IPR008183 GO:0005975|GO:0016853
Vra9g0053 295 SUPERFAMILY Galactose mutarotase-like 13 274 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vra9g0053 295 CDD D-hex-6-P-epi_like 27 275 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0053 Vra-Chr9 346476 348438 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0053 K01792 - gmx:100784457 541.191