Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0051 ATGGAGCAGTTGGAGTCTGTGGCGTTCTTCGTATTCTGCACCACAATATTTGCTTCCGCTACTGCTTCTCCACACCAAGGGGCGAGTTACCTCAAGATGGTGGTCAATGCCACCGAGTTGCCACCGGAAGACTACTACGACTACATCGTCGTCGGTGGCGGCACTGCGGGGTGCCCACTGGCGGCGACGCTCTCGCAGTCGTTTCGGGTGCTTGTGCTGGAAAGAGGAGGCGCTGGGAGCGGGAACCCCGACCTCATCAACCAAGAAGGGTTCTTGAGCAACCTCTTGAACGCCGAGAATGAGGACTCGCCGGCCCAGGCTTTCATTTCCGAAGAGGGAGTGCCCAACGCCCGCGGGCGGGTTCTTGGCGGCAGCAGCGCCATCAACGCGGGCTTCTACAGCCGAGCTCACCGAGATTTCTTCGTGAAGTCGGGCTTGCCTTGGGACCTGGCGCTGGTGAACCACTCCTACCGGTGGGTGGAGAAGGAAATCGTGTTCAGACCCAACCTCAAGACGTGGCAATCCGCGGTTCGCGATGGGTTGCTGGAAGCAGGGGTCACTCCCTACAACGGTTTCACTCTGGACCACGCCAAGGGGACCAAGATTGGGGGCTCCACCTTCGACAGCTCTGGCACCAGACACACCTCTGCGGATCTTCTCAGGCACGCTCGTTCATCAAACATCAAGGTCGCCGTTCACGCCACCGTAGAGAGGCTGCTTCTGGCGGGCTCCAGCGCTATCGGAGCCCTGTATCGTGACCAGATGGGGGGGCACCACCACGCATTCTTGCGGGAACACGGAGAGGTGATTCTGTCTGCCGGTGCCATTGGAAGCCCTCAGCTTCTTCTTCTTAGCGGGATTGGTCCCAGGCCCTATCTCTCTTCATGGGGGATCCCTGTGGCTCATCACCTACCCTACGTGGGTCACTTCCTCTACGATAATCCCAGGAACGGAATCACCATTCTCCCCTCCCTTCCACTCGATCATTCTCTCATCCAAGTCGTCGGGATCACCGACTCCGGCGCTTACATCGAGGCCGCATCCAACGTCATCCCCTTCACCTCCCCTCGCCACACCACCTTCGTCCGCTCCCCCCTCTACCTCACCGTGGCCACCATCATTTCCAAGATTTCCGGCCCTGTCTCCGCCGGATTTCTGAGACTCGCTTCCACCAACGTCGACGCAAATCCCCGAGTGAGGTTCAATTACTTCCACAATCCCCAAGACCTCGAGCGCTGCGTTAACGGGACCAGAAAGATAGCCCAAATCCTCGGGAGCAGGGCCTTGAAGGACTTCAAATTCTCCAACTGGTTGGGAGAGCCAGACTTCAGGTTCATAGGCCCCGCATTGCCGCTTCACCAAACGGACTACCCTCGCATGGCCGATTTCTGCCGCCGGACTGTGAGCACCATCTGGCACTACCACGGCGGTTGTGTGGTTGGCAGGGTGGTTGATCCCAATCTGAAGGTCATCGGAATGGATTCCCTTCGTATTGTCGACGGATCCGTCTTTAGCGTATCGCCCGGAACCAATCCTCAGGCCACCCTCATGATGCTCGGACGGTATTTTGGGTTGAAGATTATCAGAGAAAGGAACGCATCCAAATGA 1608 0.5802 MEQLESVAFFVFCTTIFASATASPHQGASYLKMVVNATELPPEDYYDYIVVGGGTAGCPLAATLSQSFRVLVLERGGAGSGNPDLINQEGFLSNLLNAENEDSPAQAFISEEGVPNARGRVLGGSSAINAGFYSRAHRDFFVKSGLPWDLALVNHSYRWVEKEIVFRPNLKTWQSAVRDGLLEAGVTPYNGFTLDHAKGTKIGGSTFDSSGTRHTSADLLRHARSSNIKVAVHATVERLLLAGSSAIGALYRDQMGGHHHAFLREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITILPSLPLDHSLIQVVGITDSGAYIEAASNVIPFTSPRHTTFVRSPLYLTVATIISKISGPVSAGFLRLASTNVDANPRVRFNYFHNPQDLERCVNGTRKIAQILGSRALKDFKFSNWLGEPDFRFIGPALPLHQTDYPRMADFCRRTVSTIWHYHGGCVVGRVVDPNLKVIGMDSLRIVDGSVFSVSPGTNPQATLMMLGRYFGLKIIRERNASK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0051 535 Gene3D - 46 520 IPR036188 -
Vra9g0051 535 SUPERFAMILY FAD/NAD(P)-binding domain 30 333 IPR036188 -
Vra9g0051 535 Gene3D - 166 470 - -
Vra9g0051 535 PANTHER OSJNBA0019K04.7 PROTEIN 28 533 - -
Vra9g0051 535 PIRSF Alcohol_oxidase 338 535 IPR012132 GO:0050660
Vra9g0051 535 PIRSF Alcohol_oxidase 24 347 IPR012132 GO:0050660
Vra9g0051 535 ProSitePatterns GMC oxidoreductases signature 2. 274 288 IPR000172 GO:0016614|GO:0050660
Vra9g0051 535 Pfam GMC oxidoreductase 46 314 IPR000172 GO:0016614|GO:0050660
Vra9g0051 535 SUPERFAMILY FAD-linked reductases, C-terminal domain 311 477 - -
Vra9g0051 535 PANTHER (R)-MANDELONITRILE LYASE-LIKE 28 533 - -
Vra9g0051 535 Pfam GMC oxidoreductase 380 521 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0051 Vra-Chr9 332586 334903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0051 11 531 Miscellaneous Gene Families AT5G51950 46.561 1.00e-153 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0051 K08248 - gmx:100820069 896.73