Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0047 ATGGCTGCTGCGACTGCTGCTGGGGTTGTTGGTGGTAATGCTTCGTCTGCTTCCTGGATGCAATTCAAAGGCAAGGAAAGGAAGCATGCCAAGATGAACAGATCTAGGGTATATTGCTCTTATTCTTCTTCTGTCATGGATCCTTACAAGACCTTGAGAATACAACGAGGTGCCTCTGAATCTGAAGTCAGGAAGGCTTTCCGACAGCTCGCTCTGCAGTACCATCCAGATGTATGTAGAGGGAGCAATTGTGGGGTGCAATTTCACGAAATCAACGAGGCATATGATACTGTGATGGCTAGGTTGAGAGGAGAATCAACTGCGACAGAAACTTACGAGAGCATCTATGATAATGACACAGATGAGTCACTGAGAGAAACGAACGGCCCAGATTATGACATGTGGGAGGAGTGGATGGGGTGGGAAGGAGCAGGAATCCGTGACTACACTTCACATATTAATCCATACATATGA 474 0.4662 MAAATAAGVVGGNASSASWMQFKGKERKHAKMNRSRVYCSYSSSVMDPYKTLRIQRGASESEVRKAFRQLALQYHPDVCRGSNCGVQFHEINEAYDTVMARLRGESTATETYESIYDNDTDESLRETNGPDYDMWEEWMGWEGAGIRDYTSHINPYI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0047 157 SMART dnaj_3 46 103 IPR001623 -
Vra9g0047 157 ProSiteProfiles dnaJ domain profile. 47 120 IPR001623 -
Vra9g0047 157 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 6 157 - -
Vra9g0047 157 PRINTS DnaJ domain signature 49 67 IPR001623 -
Vra9g0047 157 PRINTS DnaJ domain signature 67 82 IPR001623 -
Vra9g0047 157 PRINTS DnaJ domain signature 83 103 IPR001623 -
Vra9g0047 157 PANTHER CO-CHAPERONE PROTEIN DJLA 6 157 - -
Vra9g0047 157 Gene3D DnaJ domain 19 105 IPR036869 -
Vra9g0047 157 Pfam DnaJ domain 47 98 IPR001623 -
Vra9g0047 157 CDD DnaJ 47 97 IPR001623 -
Vra9g0047 157 SUPERFAMILY Chaperone J-domain 43 141 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0047 Vra-Chr9 315709 317436 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0047 - - gmx:100780336 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0047 9 315709 317436 Vra9g0047 9 315709 317436 ECH