Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0041 ATGGCCATTTCAATGATTTCATCAACATTTTCTTCTTTCAAGCTCACTTTCCTTCGCCCAAGTCAACTTCAACCTCTTACTTTCACTTTCCCATCTTCTTCTGCTATGGCTCAACCCCTCCCACTCAGGTTGGCTGCAAAAATTCACAGCCTTGGAATTGGAAGAGAAGGTGCACCCTCCGATCCTAAGGCCGGTGTTTCGCTTTACAAACCTAAATCCTACCAAGTTCTCGTCAATGATGCTGCCAATTCCCTAGCTTTCGCACTTCAAGACGGAAAAATTCGTCTCGAAATCGATTTCCCGCCTTTGCCCACCAACGTGTCTTCCTACAAGGGATCCTCAGATGAGTTCATTGATGCCAACATTCAACTTGCCTTGGCTGTTGTAAGAAAGCTCCAGGAGAAACAGGAAACCAGAGCTTGCATAGTATTCCCTGATAAACCAGAAAAGCGCCGAGCCTCTCAATTGTTCAAAACAGCTCTAGATTCCATTGATGGCATTACCATAGGTTCCTTAGATGATGTCCCAGCTGGACCTATGACTTCGTTTTTCAGATCTGTCAGGAACACCCTTGATTTTGACTTTGAAGATGACAACGAAGGTCGTTGGCAATCTAGTGATCCTCCATCAATCTACATATTCCTTAACTGCAGTACTCGTGAACTTGCATATATAGAGAAGTATGTGGAAAAAATTGCTACATCAACCCCAACACTTTTATTTAATCTTGAACTAGATACACTACGTGCTGATTTAGGCCTTCCAGGCTTTCCTGCCAAAGATTTGCACTACCGCTTTCTTTCTCAATTCACTCCGGTTTTCTACATCAGAATCCGAGAGTATTCAAAGACAGTTGCAATTGCGCCATATATTGTCAATTATTCTGGAGCCGTGTTCCGCCAGTACCCAGGTCCTTGGCAGGTGATGCTTAAACAAGCAGATGGTTCTTATGCATGCATAGCAGAAAGTGCTGATCGGTTCAGCCTTGGTGAGGCCAAAGAGGAGTTGCTAAGGGTCTTGGGGCTTCAAGAAGAAGAGGGGAGCTCTCTAGAATTTCTCCGAAGGGGCTACAAGGCAAGCACGTGGTGGGAAGAAAATTTTGATTCAGAAGTATCTTCTGCATGGCGGACTTGA 1134 0.4462 MAISMISSTFSSFKLTFLRPSQLQPLTFTFPSSSAMAQPLPLRLAAKIHSLGIGREGAPSDPKAGVSLYKPKSYQVLVNDAANSLAFALQDGKIRLEIDFPPLPTNVSSYKGSSDEFIDANIQLALAVVRKLQEKQETRACIVFPDKPEKRRASQLFKTALDSIDGITIGSLDDVPAGPMTSFFRSVRNTLDFDFEDDNEGRWQSSDPPSIYIFLNCSTRELAYIEKYVEKIATSTPTLLFNLELDTLRADLGLPGFPAKDLHYRFLSQFTPVFYIRIREYSKTVAIAPYIVNYSGAVFRQYPGPWQVMLKQADGSYACIAESADRFSLGEAKEELLRVLGLQEEEGSSLEFLRRGYKASTWWEENFDSEVSSAWRT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0041 377 Pfam Domain of unknown function (DUF1995) 71 333 IPR018962 -
Vra9g0041 377 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 34 377 IPR044687 -
Vra9g0041 377 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 34 377 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0041 - - gmx:100803725 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0041 9 297241 301359 Vra9g0041 9 297241 301359 ECH