Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0036 ATGTCGGGCCCACCCAGAGTCCGATCCATGAACGTCACGGTCGCCGACCCCGACGCGCGTCCAGTGCTCGTCCCGGCAGGCAACAAAGTCCGCCCCGCAGTCGAAGGACGCAAGCCGGTGAAGAAATTGACGCCGGAGACAGAGAAGAAGCCGGTGGCGCTTTCAAATGCGCCACCGCAATGCATCTCTGCTCCTCCACCGTTTATTTTGCGGCGGCAGGAGCGTCACCAGGCCGTGCTGAAAAACCTGTCTTCGATGAACGCTTCGTACTCCTCCGACGCGTCGTCGACGGATTCCTCCACTCACAGTAGCGGCGCGTCGTCAAGCGGGAAGGTGGCTCGTCGGGTTAGTGTGCAGTTGAGGAAGAAGCAGTGTGGTCCCAAGGCGGAGAAGGTGAGTAGTGACAATGTGGGTGGTTCTGATGATGTCGATTTGAGTGATAGCTTGGAGGGCAAGAAACGGTGTGCTTGGGTTACACCAAATACAGAGGCATGCTATGTTGCTTTTCATGACAACGAGTGGGGAGTTCCTGTTCATGACGACAGGAAACTGTTTGAGTTGCTTAGCTTCTCTGGAGCCTTGGCTGAGCTTACGTGGCCTACTATTCTTAACAAAAGGCAGCTATTTCGGGAAGTCTTTTTGGATTTTGATCCTAGTGCAGTTTCTAGAATGAATGAGAAAAAGATAGCTGCACCAGGAAGTCCTGCCAACTCATTGTTATCAGAACTCAGGTTGCGATCAATAATTGAAAATGCACGTCTGATGTGTAAGGTAATTGAAGAGTTTGGATCTTTTGACACATTTATTTGGAACTTTGTTAACCACAAGCCTATAGTTAGCCAATTCAGGTACTCACGTCAGGTACCTGTGAAATCTCCGAAAGCTGAAGTCATAAGTAAAGACCTTGTAAAGAGAGGTTTCAGGAGTGTTGGACCAACAGTCATCTACACTTTCATGCAAGTGGCTGGCCTAACAAATGACCATCTTATCAGTTGCTTCAGATTCAAGGAGTGTACCTCCAATGCAGAAGCCATGGCCAACGAAAGCTCTCTCAACTCCAAGCTCAAAGACAAGCCAAACGACGAGACAACCGATGTAGGCCTGTTACTGGCTGTGAACAAAATGAACTTCTCCTCTAAGTAG 1143 0.4961 MSGPPRVRSMNVTVADPDARPVLVPAGNKVRPAVEGRKPVKKLTPETEKKPVALSNAPPQCISAPPPFILRRQERHQAVLKNLSSMNASYSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCGPKAEKVSSDNVGGSDDVDLSDSLEGKKRCAWVTPNTEACYVAFHDNEWGVPVHDDRKLFELLSFSGALAELTWPTILNKRQLFREVFLDFDPSAVSRMNEKKIAAPGSPANSLLSELRLRSIIENARLMCKVIEEFGSFDTFIWNFVNHKPIVSQFRYSRQVPVKSPKAEVISKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSNAEAMANESSLNSKLKDKPNDETTDVGLLLAVNKMNFSSK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0036 380 Pfam Methyladenine glycosylase 162 334 IPR005019 GO:0006284|GO:0008725
Vra9g0036 380 MobiDBLite consensus disorder prediction 88 114 - -
Vra9g0036 380 Gene3D Hypothetical protein; domain 2 152 335 - -
Vra9g0036 380 MobiDBLite consensus disorder prediction 18 61 - -
Vra9g0036 380 SUPERFAMILY DNA-glycosylase 153 338 IPR011257 GO:0003824|GO:0006281
Vra9g0036 380 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 379 - -
Vra9g0036 380 PANTHER OS04G0501200 PROTEIN 1 379 - -
Vra9g0036 380 MobiDBLite consensus disorder prediction 88 144 - -
Vra9g0036 380 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0036 Vra-Chr9 270797 275479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0036 K01246 - gmx:100805836 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0036 9 270797 275479 Vra9g0036 9 270797 275479 ECH