Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0030 ATGAGCAAGCATTCTGACCTGAAAATGGCCTCTCCTGACGAGACTGAGAGGAGTGTGGCCAAAAAACTGAGACATTTGGGGAGGAAGCTCCTCAAGGGCTCTTCACTTCACAAGCTTCTGCAGTTGCTTCATAAATTGGAGCTTGTATTATCAACCCTGGATCAAGAACCAACTAAGCTAATTCAAGAATCACTTGTACCTTGCATGAAGGCATTGATTTCAGATGAACTTTTGAGGCACACAGATGAGGATGTTAAGATTCTAGTTATATCTTGCATCTCTGAGATTGCAAGAATCACAGCGCCAGATGCCCCTTATGATGATGGACAAATGAAGGAAATCTTCAAGCTCACTGTGGCATCTTTTGAGAAGTTGTCTCACATATCTGGCCGTGCCTATGAAAAAGTGCTTATCATACTTGACAATGTCAATAAGGTCAGATTATGCTTGGTCATGCTGGACCTTGAGTGTAATGACCTGATTATTGAAATGTTTCAGCATTTCTTGAGATTTATAAGGTCAAACCATCCCTGTAGTGCATTTCATTCAATGGAATCAATAATGACTATGATTTTACAAGAAAGTGAACAAATTTCCCCAGATCTTCTTAGACCACTGTTGGATAGTGTAGGAAATGAAAATCGGACTGTTTCACCTATGTCTTGGACATTGGGGGAGAAAGTAATCAGAAACTGTACTGCTAACCTCAAGCCTTATCTCATGAAGGCAGTGGAGTCCTCAGGCAGAGCGTTAAATGAGTATGCACAGATAGTAACTGATATTTGCCAGAATGAATCTGAATCCCCTCAATGTGATGATTCGAATGGTTCTAAGAAGACAGTGGTTCAGGAAGCTGAGAACAAGATTAATGTTCCTAATGATGCAAAGGAACAACCACACGATGAAACCAATGGTCATGAACCCAATGTTACTGGTAAAAGAGATGTCCAAATTTTGGATGATACAAAGTCAAACAGAAGGTCCATTCTTGATGGCGAAGTTATAAAAAAAACTGGTTCAAAAAGGAGATCATGTTCTGAAATTTCCAAGAACTCAAAAAAAGGGAGTGCAAAAACCAAGTTGGAAACTGAAAATTTAGAGTCTTTTCAGGAACCAAAATCAGAAACTCAGCTAAATACTGTGCCAAGGAAGAGGGGCCGTAAGCCTAATTCTCTGATGAATGCAGAAGAAGGCTATGATCACTCATGGATTTGTCGGGAAACTGAAGTTGGAAGATCAACACTATCCAGAAAGTCATGCAAATCCAGGTTTCCTTTTCGATCTTCTGAAAAAGCTACTTCCAGAAAAGATAAGTTGCACCGAAAGCCTAAGACTGTAAGTGAGACTCTAGTTCATAAGCCTAAAGGTGAGGACATAGCAAAAACTGCCGAACTCAGAAGGACTCACAATATTAGCAATGATTTTCCCCCAAATGATACAAGTGAAGGTTGTGAAGCTTCAGCTTCTAAGCCTAAAGCTGATGCTTCTCCTTCTACAAATAATAATATTTCTGATGGATGTCACAGCAAACGAGGTCGGAGACGGAAATTAAATATCACGGGGAATCAAGGTGTTCATTCCAATTCTTTGTCAATGTTAAAAGACAACTTGAATCCTCCGCCTCAGAAGATTTCTTTGGATTCTCCAACAGTTAGGTTGGAAAAGGAATCTGAAGCAAGGAATACCTCTGAACAAAAACCCATTAGGAAAATCAAATTTTCCTTAAGGCTTGATGGAAAACTTGTCATGGGTCCAGAATCAGCTGCTAATGCGGAGCCTAACGATTCATGTGGAGAAGAGGGGAAACACAAGTCGTCTATGAATGATGAGCCAGCAAGTATTAAAGAGGGCAGATTCTCAACTCAAACAAATGTTAAAAGGAGGAGGCTTGATGCTACTCCTAATGAGGGCCTCAACAAATTATCAGCAGTGAAGGATCTGACAGCAGTATCTGCAAGTAAAACATTAAATAGTGTCAAGGAAACCCCACAAGCAAGGCCGAGGAGAAGACACAGTAATGTGAGTGCCGAGGCATCTGAATGTCTTTCCAAGGATAAATCATTGGTCGGTACTAGAATCAAGGTCTGGTGGCCAAAAGATAAGACGTTTTATGAAGGTGTTATCGAATCTTATGATCCTATCAAAGGAAAGCACAAGATTTTGTATGCTGACGGTGATGTTGAAGTGTTGAACCTCAAAAGACAGAAATGGACAGTAGTTGACGTTTCTTTAGACGAGGAAGGGCTTACACTTCAGAGGCTTGCAGAAGCATCAGACGTAGCAGAAAAAGGTAAGGAAAAATCAGAACTGGTGTCAGCCAAAGCTGCAACTATCAAATCTCAGTCCAGAAAAGACTCTAAGAAGCCTAGAAACCAGAAGAGGAACAGCTGA 2391 0.4061 MSKHSDLKMASPDETERSVAKKLRHLGRKLLKGSSLHKLLQLLHKLELVLSTLDQEPTKLIQESLVPCMKALISDELLRHTDEDVKILVISCISEIARITAPDAPYDDGQMKEIFKLTVASFEKLSHISGRAYEKVLIILDNVNKVRLCLVMLDLECNDLIIEMFQHFLRFIRSNHPCSAFHSMESIMTMILQESEQISPDLLRPLLDSVGNENRTVSPMSWTLGEKVIRNCTANLKPYLMKAVESSGRALNEYAQIVTDICQNESESPQCDDSNGSKKTVVQEAENKINVPNDAKEQPHDETNGHEPNVTGKRDVQILDDTKSNRRSILDGEVIKKTGSKRRSCSEISKNSKKGSAKTKLETENLESFQEPKSETQLNTVPRKRGRKPNSLMNAEEGYDHSWICRETEVGRSTLSRKSCKSRFPFRSSEKATSRKDKLHRKPKTVSETLVHKPKGEDIAKTAELRRTHNISNDFPPNDTSEGCEASASKPKADASPSTNNNISDGCHSKRGRRRKLNITGNQGVHSNSLSMLKDNLNPPPQKISLDSPTVRLEKESEARNTSEQKPIRKIKFSLRLDGKLVMGPESAANAEPNDSCGEEGKHKSSMNDEPASIKEGRFSTQTNVKRRRLDATPNEGLNKLSAVKDLTAVSASKTLNSVKETPQARPRRRHSNVSAEASECLSKDKSLVGTRIKVWWPKDKTFYEGVIESYDPIKGKHKILYADGDVEVLNLKRQKWTVVDVSLDEEGLTLQRLAEASDVAEKGKEKSELVSAKAATIKSQSRKDSKKPRNQKRNS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0030 796 MobiDBLite consensus disorder prediction 584 618 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 658 678 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 549 566 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 416 566 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 520 545 - -
Vra9g0030 796 Coils Coil 36 56 - -
Vra9g0030 796 SUPERFAMILY Tudor/PWWP/MBT 687 727 - -
Vra9g0030 796 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 20 792 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 469 485 - -
Vra9g0030 796 Gene3D - 676 736 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 423 468 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 290 325 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 287 325 - -
Vra9g0030 796 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 20 792 IPR039776 GO:0007064
Vra9g0030 796 CDD TUDOR 690 736 IPR002999 -
Vra9g0030 796 MobiDBLite consensus disorder prediction 340 369 - -
Vra9g0030 796 SUPERFAMILY ARM repeat 43 264 IPR016024 -
Vra9g0030 796 MobiDBLite consensus disorder prediction 492 506 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 762 796 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 596 611 - -
Vra9g0030 796 Pfam Sister chromatid cohesion protein PDS5 protein 38 240 - -
Vra9g0030 796 MobiDBLite consensus disorder prediction 340 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0030 Vra-Chr9 220017 229270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0030 - - vra:106773633 1515.75