Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0029 ATGCCGCTGATTTTACCGAAAAGCGATTCGATCCAGATTCGCGAGGTGTGGAACGATAACCTGGAAGAGGAATTCGCGTTGATTCGCGAAATAGTGGACGATTACCCTTACATAGCGATGGACACGGAGTTTCCGGGGATAGTTCTCCGACCGGTGGGGAATTTCAAGAACAGCTACGATTACCATTACCAAACCCTAAAGGACAACGTCGACATGCTAAAGCTCATACAATTGGGGCTCACCTTCTCAGACGAGTACGGCAACCTTCCCACGTGCGCCACCGACGTCGATGACGATTCCCACACGTGCTGCATCTGGCAATTCAATTTCCGGGAGTTCAACGTCAACGAGGACGTCTTCGCCAACGATTCCATCGAGCTTTTGCGCCAGAGCGGCATCGATTTCAAGAAGAACAACGAGGACGGCATCGACGCCCGCCGTTTCGGGGAACTTCTCATGTCGTCCGGGATCGTTTTGAATGACAACGTTCATTGGGTTACTTTCCATAGCGGTTATGATTTCGGGTACTTGTTGAAGCTCTTGACGTGTCAGAATTTGCCCGATACGCAAGCGGAGTTCTTCAACCTCATCAACATGTATTTCCCCACTGTATACGACATCAAGCACCTCATGAAATTCTGCAACAGCCTTCACGGCGGTTTGAACAAGCTTGCCGAGTTGTTGGAGGTCGAAAGGGTCGGGATTTGCCATCAGGCCGGTTCCGATAGTTTGCTCACTTCATGTACATTCAGGAAATTGAAGGACAATTTCTTTAGTGGCTCGTTGGAGAAGTATGCTGGTGTCTTGTATGGGTTAGGTGTTGAGAATGGACAGGGAGCCCATTGA 846 0.4965 MPLILPKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEYGNLPTCATDVDDDSHTCCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNNEDGIDARRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQNLPDTQAEFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGAH* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0029 281 Pfam CAF1 family ribonuclease 166 226 IPR006941 -
Vra9g0029 281 Pfam CAF1 family ribonuclease 16 143 IPR006941 -
Vra9g0029 281 Gene3D - 1 276 IPR036397 GO:0003676
Vra9g0029 281 SUPERFAMILY Ribonuclease H-like 4 274 IPR012337 -
Vra9g0029 281 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4 280 IPR039637 GO:0004535|GO:0030014
Vra9g0029 281 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 4 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0029 Vra-Chr9 217007 218576 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0029 K12581 - gmx:100789409 546.584