Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0027 ATGGACTACAGCTCCGAAGAAGATTCAGATCTAAGTGAATCTGAGATTTATGACTACTCAGAGAAACCTTATGAACTGTTAAGGGCTGGAAAATATAAGGTTAAAAACTTGAATGGAACTCTTAGATGCCCTTACTGTGCTGGGAAGAAAAAACAAGACTACAAATATAAGGATTTATTGCAACATGCATCTGGTGTTGGTAAGGGTTCTGCTAACAGAAGTGCAAAACAAAAGGCCAACCACCTTGCTCTAGCAAAGTATTTGGAGATTGATCTAGCTAGTGAAGGAGAGCTAATCCAGAACCCAGCTTTACCCCCAGTTGTTAGTCAACCTTCACAGTTAGAATGTGTTTATTATGTTTGGCCCTGGACTGGCATAATTGTTAACATAAAGGGTAAATTGATTGATTCTACACACTGGTTGAAGGAATTTGCTAAATTCAGGCCAACTGATTCCCATATATTTATGAAAGACGGTGACATGGCTGCTCAAGCTGTAGTAGTGTTCAATAGTGACTGGAATGGTTTCATAAATGCAACTGAATTTGAGAAGTCTTTTGAAACTGCACGTCATGGTAAAAAGGACTGGAGCTCAAACAAGTTAGAAGCTGACTCAAATATTTATGGATGGGTCGCGCGGGAAGATGATTATAATTGTGGAGGGCCAATAGGGGAATACCTCCGCAGCAAAGGAACATTGAGGACAGTTTCAGATATTGTTCAAGAAGCATGTGAAAGCAGAAATCATATTGTGACAAACCTCGCGAAAGAAATCGAGATAACAAATGACAACCTTGACGAAATGCAGTCTAAGTTTAATGTGAAGACTATGTCCTTGAGTAGAATGCTTGAGGAGAAAGATAAGCTTCACAATGTTTTTGAAGAAGAAACAAGGAGTATGCAGCGTAGAGCACGTAATGAAGTACGACGGATCTTGGATGAGCAAGAAAAATTGAGTAGTGAATTGGATGAGAAAAGGCGGAAGCTTGATTCTTGGAGCAGAGATCTAAACAAGCGTGAAGTACTAACTGATCAAGAGAGGCAGAAACTTGCAGACGACAAGAAGAAGAAAGATTTGAGGAATGAATCACTCCTGTTGGCTTCAAAAGAACAGAAGATAGCGGATGAAAATGTCTTAAGACTTGTTGAAGAGCAGAAGAGAGAGAAAGAGGAGGCCTATAACAAGATACTTCAGCTGGAAAAGCAGCTTGATGCCAAACAGAAATTGGAAATGGAAATTGAAGAGCTAAAAGGGAAATTGCAAGTCATGAAGCATCTTGGAGATGAAGATGATACAGCTGTTCAAAAAAGGATAGAAGAAATGAATGAGGAATTGCAAGAAAAAATAGAGAATTTGGAATCTGTGGAGAGCATGAACCAAACCCTCATTGTGAAGGAACGTCAGAGTAACGATGAACTGCAGCAAGCTCGCAAAGAATTAATAAAAGGGTTAGAGGATATGCTTAATGGTTCTAAAGGTAATATTGGGCTCAAGAGAATGGGAGAGCTTGATCAGAAGGTTTTTGTGAATAAATGCAAGGAAAGATTTTCTCCTCAAGAAGCTGGGACCAAAGGTGTCGAGCTTTGCTCTTTGTGGCAGGAAAAGGTGAAGAATTCTGCTTGGCATCCATTTAAAGTGATCACAATTGATGATAAATCAGAGAAAATTTTAGATGAAAATGATGACAAGTTACGAAGCCTCAAGCAGGAATGGGGAGATGAGATATATTCAGCTGTTGTAACAGCCGTGACAGAAATAAACGAATACAATGCAAGTGGTGGATATACTGTTGCAGAGCTATGGAACTTCAAGGAAAAAAGAAAGGCTACATTGAAAGAAGTTATCACTTATATTGTGGAACGTATCAAGCCACCAGCTAAGCGCAAAAGAGGGTAG 1896 0.394 MDYSSEEDSDLSESEIYDYSEKPYELLRAGKYKVKNLNGTLRCPYCAGKKKQDYKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLEIDLASEGELIQNPALPPVVSQPSQLECVYYVWPWTGIIVNIKGKLIDSTHWLKEFAKFRPTDSHIFMKDGDMAAQAVVVFNSDWNGFINATEFEKSFETARHGKKDWSSNKLEADSNIYGWVAREDDYNCGGPIGEYLRSKGTLRTVSDIVQEACESRNHIVTNLAKEIEITNDNLDEMQSKFNVKTMSLSRMLEEKDKLHNVFEEETRSMQRRARNEVRRILDEQEKLSSELDEKRRKLDSWSRDLNKREVLTDQERQKLADDKKKKDLRNESLLLASKEQKIADENVLRLVEEQKREKEEAYNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDTAVQKRIEEMNEELQEKIENLESVESMNQTLIVKERQSNDELQQARKELIKGLEDMLNGSKGNIGLKRMGELDQKVFVNKCKERFSPQEAGTKGVELCSLWQEKVKNSAWHPFKVITIDDKSEKILDENDDKLRSLKQEWGDEIYSAVVTAVTEINEYNASGGYTVAELWNFKEKRKATLKEVITYIVERIKPPAKRKRG* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0027 631 Coils Coil 301 335 - -
Vra9g0027 631 PANTHER RIBONUCLEASE P SUBUNIT P38 4 630 IPR045177 GO:0080188
Vra9g0027 631 Coils Coil 379 426 - -
Vra9g0027 631 Pfam XS domain 119 218 IPR005380 GO:0031047
Vra9g0027 631 CDD RRM_like_XS 119 217 IPR005380 GO:0031047
Vra9g0027 631 Coils Coil 251 271 - -
Vra9g0027 631 Gene3D XS domain 117 273 IPR038588 -
Vra9g0027 631 Coils Coil 431 479 - -
Vra9g0027 631 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Vra9g0027 631 Pfam XH domain 498 624 IPR005379 -
Vra9g0027 631 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0027 Vra-Chr9 204006 209552 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0027 - - gmx:100798940 1029.62