Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0025 ATGGAGGTTCCGAGTTCCTGGGATGCCCTTCGCAAGCAGGCGAGAAAACTTGAAGCTCAGTTAGATGAGCAGATGAATTCTTATCGTAAATTGGTTTCTGCGAATGTTTCTTCAAAAGCTGATGCCTCAGAGAGTGATCTAGAGTCTTGGATTGAGCGATTACTAAAACAACTTCAACAAGTAAATGCACAGATGCAAGCTTGGGTGTCAGCTGGTGGTTCAGAAATGGTTTCTCACACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCACCCAGGAATTTTATCGTCTTCGTTCAAGTCTTCTAGCTAAGCAAGAACATGCTTCACTGCTGGAAGATTTTAAAGAATTTGATCGGACAAGATTAGACTTGGAACAAGGTGTAGACACTGAACAGCATGCACTCCTAAAAGAGCGTGCATCTATCAGCCGAAGTACAGGACATATGGACAACGTTATTTCACAAGCACAAGCAACACTAGGAGCACTTGTCTTCCAACGTTCAACATTTGGCGGTATCAATTCGAAGCTTGGCAACGTTAGCAGTCGCCTCCCAACGGTAAATAATATACTTTCGGCAATAAAGAGGAAAAAGTCAATGGATACCATCATACTTTCCCTTGTTGCAGCCGTATGCACATTTCTCATTTTCATCTACTGGCTATCCAAGTGA 675 0.4237 MEVPSSWDALRKQARKLEAQLDEQMNSYRKLVSANVSSKADASESDLESWIERLLKQLQQVNAQMQAWVSAGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLLAKQEHASLLEDFKEFDRTRLDLEQGVDTEQHALLKERASISRSTGHMDNVISQAQATLGALVFQRSTFGGINSKLGNVSSRLPTVNNILSAIKRKKSMDTIILSLVAAVCTFLIFIYWLSK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0025 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Vra9g0025 224 PANTHER GOS-28 SNARE- RELATED 1 224 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Vra9g0025 224 Coils Coil 51 71 - -
Vra9g0025 224 Pfam Snare region anchored in the vesicle membrane C-terminus 135 199 - -
Vra9g0025 224 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1 1 224 - -
Vra9g0025 224 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0025 Vra-Chr9 188053 192572 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0025 K08495 - gmx:100797885 408.683