Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0021 ATGCTGTGCAGGAAGAGCTCAAAAAACGGCGTCGCTTCGGGATCGGTCCCGGTGTACCTCAACGTATACGATCTGACACCGATGAACGGTTACGCTTACTGGTTCGGCCTCGGAGTTTACCATTCCGGCGTGCAAGTTCACGGCGTTGAATTCGCCTTCGGGGCTCACGAGTATCCGTCGACGGGGATATTCGAGGGGGAACCAAGGAGGTGCGAAGGTTTCACTTTCAGAAAAACGATTCTGATCGGAAAAACCGACATGGGACCCGGTGAGGTGAAGACGGTTATGGAAGAACTCGCCTCTGAATACAGAGGAAACGCTTACAATCTCATCACCAAAAATTGCAACCATTTCTGCAACGATGCTTGTCTAAGACTCACCGGAAATCCAATTCCAAGTTGGGTCAATCGTCTTGCCCGAATCGGTTTTTTATGCAACTGTGTTCTTCCTGTGACACTGAACTCAACAAAAGTTAGGCATCACAGAATGGAAGAGAAGCCATGTGAGGGAGAAAAGGAAGCTTTGGCGAGTGAGGGAAAGAAACCAACTTCAACACCATCCCCTGCGAGAGGGCGCAGGGGAAGGAGTAGAACCCGACGCCCACTCCCTCCTCCTTCACCGTTGATTGTTGGGTCTTCTTCGTGA 645 0.5085 MLCRKSSKNGVASGSVPVYLNVYDLTPMNGYAYWFGLGVYHSGVQVHGVEFAFGAHEYPSTGIFEGEPRRCEGFTFRKTILIGKTDMGPGEVKTVMEELASEYRGNAYNLITKNCNHFCNDACLRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHRMEEKPCEGEKEALASEGKKPTSTPSPARGRRGRSRTRRPLPPPSPLIVGSSS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0021 214 MobiDBLite consensus disorder prediction 160 214 - -
Vra9g0021 214 Gene3D PPPDE domains 12 168 IPR042266 -
Vra9g0021 214 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Vra9g0021 214 PANTHER F23A5.4 PROTEIN 5 214 - -
Vra9g0021 214 SMART DUF862_2a 16 154 IPR008580 GO:0008233
Vra9g0021 214 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Vra9g0021 214 MobiDBLite consensus disorder prediction 160 178 - -
Vra9g0021 214 PANTHER DESUMOYLATING ISOPEPTIDASE 5 214 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0021 Vra-Chr9 167556 169379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0021 K22763 - gmx:100796813 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0021 9 167556 169379 Vra9g0021 9 167556 169379 ECH