Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0020 ATGCGACGCTCTTCTGCATCCAAAAAGACGGGTCAATCCTATTCCACTCCCACCGCCACCGATCTCTTCCGCTCCGCCTCAAGTAAAGCAAGCTCGAAGGAATCTGAACGAATTGATAGTTTATTCTATTCATTTGCTAATGGGTCAACCGGGATGATTGACCCAGAGGGAATCGAAACACTTTGTGCTGCTATGGAGGTTAATCATACAGATGTGAGGGTTTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGATATTTTACATTGGACGAATGGAGGAGAGGCTTAAAAGCATTAAGGGCCGATACAATTAGTAAATTGAGGAAGGCACTTTCAGACCTAGAAAAGGAGGTCAGGAGGCCATCAAACTTTGCAGATTTCTATTCATATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAGTTACTTACTCTTGTTTTGGGTTCAACATTTCCGTCCCAAGTCAACTCATTTGTGGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGCTTTTGCAATGAGATAAGTTATCCAGCCCTTGATGACTATGATCCTGAGCTTGCCTGGCCCTTGATCCTGGACAATTTCGTTGAATGGGTGCGGGAAAAGGAAAAAATAATCTGA 693 0.417 MRRSSASKKTGQSYSTPTATDLFRSASSKASSKESERIDSLFYSFANGSTGMIDPEGIETLCAAMEVNHTDVRVLMLAWKMKAEEQGYFTLDEWRRGLKALRADTISKLRKALSDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPSQVNSFVEYLKTQNDYKVINMDQWMGFFRFCNEISYPALDDYDPELAWPLILDNFVEWVREKEKII* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0020 230 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 1 227 - -
Vra9g0020 230 ProSiteProfiles DCUN1 domain profile. 33 224 IPR005176 -
Vra9g0020 230 Gene3D Cullin, PONY binding domain 123 230 IPR042460 -
Vra9g0020 230 Pfam Cullin binding 108 222 IPR005176 -
Vra9g0020 230 Gene3D - 31 121 - -
Vra9g0020 230 PANTHER RP42 RELATED 1 227 IPR014764 -
Vra9g0020 230 SUPERFAMILY EF-hand 28 194 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0020 Vra-Chr9 160892 165325 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0020 K17824 - gmx:100499856 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0020 9 160892 165325 Vra9g0020 9 160892 165325 ECH