Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0017 ATGTCAGAAGAAGAATTACACTTACCTCGTGAATGCTGGGAATTGGTATTCAAATTCCTCAAACCCATTCCTCATTTCGAACCTCTCTCCCTTGTCTCAACCCAATTCCTCTCCGTCACCAACCTCCTCCGAACCTCACTTACCATATCCAACCCTACGCTTCCCTTTCTCCCCAACCTCTTCCGAAGGTTCCCATCCATCACCTCCCTTCATATCACGCGCCTCCACCATTCCCACCTCCACACGCTCCTCCTCCAGCTCTCACGCGCCGCCCTACCGCTCCAATCCCTCAACCTCTCCGGCCACCCCTCCCTCCCCTCAAATGGGTTGCGCGCGTTCGCCAGAAAGATCCCAACTTTGCAATCCCTCACCTGCTCCCACATGGCTTGTCTCCGAAACGCCGATCTCCTTCTAATCGCTGATTGTTTCCCTTTCCTCGAACATCTCGACCTCAGTTTTCCTGAAAATAACGACAATTCAACCGACCCAGTTTCCGATTTCGGCGTAAAGGCTCTCTCTTTGGCCCTCCCCAAGCTCCGTAGCGTTAACCTCTCCGGCAATTACTTCATCAGCGACACTTCCATTCTCAGTCTCTGCAAGAACTGCGAGCTTCTCGAGGAAATTGTAATCTTCGAGTGCCACTTCATCACGCAGCGTGGCATCGCTTCCGCGATTCGTGAAAGACCGTGTTTGCGTTCTTTCTGCGTTAGCAATTTCGGGTATGGAACAAAGAAGGGTGACATTGCCAGACCCTATGTGACTTCTGATTTCATCAGTGCGTTGGTGGGTTTGAAGGGCTTGACTTGTCTAGATTTGTCGTATTCTTCTATCTCTGATGAGTTGCTATGCTGTGTTGCGGAGGAAGGGATTCCTTTGAAGAAGCTTGTTTTACAAGGTTGTTGTAACTACACTTACGTTGGAGTGTTGTGCTTGTTGTCCTCATGTCAGTCAATGGAGCATTTGGATCTTCAAAACAACGAGTTTCTTTGTGATCGGCGTGTGGAAGTGTTGTGTGAGTTTCTTGGGAATTTGGTGTCTATAAATGTCAGTGGTTGTAGGACATTAACCGATTTAGCTTTGCTTGCACTCATTAAGAACTGTCCTTTGTTGAATGAGATCAAAATGGAGGCAACAGATGTTGGGAAGAAGGGGGTCGATGAGGAGTTGGTGAAAGGTATTGTGAATTATCGAGTGAAGTCTCTCTATTTGGGAAGAAATTCGTGGTTGAGGGATGAAAGCGTTGAAATGATTGCTTCTGTTTGCCCGAGTTTGGAGGTGCTCGATTTGAGTTCTTGCTGTGAAATATCTGAAGGTGTTGTTGAGGTTTTGAGGAGGTGTAGCGAGGTTAGGAATTTGAGCTTGGCCTTTTGTTCAGGAGTGAAGTTAAAAGGGCTGGAATTTGAAGTTCCAAAACTAGAGGAGTTGAACTTGTCAGGATCAAGAGTTGATGATGAAACACTTTCTGTGATCTCAAAGTGTTGTCGTTGGTTGCTGCATTTGGACTTGGAAAATTGCTATAAGGTCACAGCCAATGGAGTTAGGGAAGTGGTGGAGAACTGCAGGCGATTGAGGGAGATTAATTTGGTGTCTTGTTGTGAAGTGGAAGCTAGTGTTGTAGCTTGGATGGTATTTTCAAGGCCATCATTGAGAAGGATAATGGCCCCTCCGAGTTTTGATCTTAGTGGTGGCCAGAGGGAATTTCTTTTGCGTCATGGCTGCATAGTTAGCTTGTAA 1734 0.4689 MSEEELHLPRECWELVFKFLKPIPHFEPLSLVSTQFLSVTNLLRTSLTISNPTLPFLPNLFRRFPSITSLHITRLHHSHLHTLLLQLSRAALPLQSLNLSGHPSLPSNGLRAFARKIPTLQSLTCSHMACLRNADLLLIADCFPFLEHLDLSFPENNDNSTDPVSDFGVKALSLALPKLRSVNLSGNYFISDTSILSLCKNCELLEEIVIFECHFITQRGIASAIRERPCLRSFCVSNFGYGTKKGDIARPYVTSDFISALVGLKGLTCLDLSYSSISDELLCCVAEEGIPLKKLVLQGCCNYTYVGVLCLLSSCQSMEHLDLQNNEFLCDRRVEVLCEFLGNLVSINVSGCRTLTDLALLALIKNCPLLNEIKMEATDVGKKGVDEELVKGIVNYRVKSLYLGRNSWLRDESVEMIASVCPSLEVLDLSSCCEISEGVVEVLRRCSEVRNLSLAFCSGVKLKGLEFEVPKLEELNLSGSRVDDETLSVISKCCRWLLHLDLENCYKVTANGVREVVENCRRLREINLVSCCEVEASVVAWMVFSRPSLRRIMAPPSFDLSGGQREFLLRHGCIVSL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0017 577 Gene3D Ribonuclease Inhibitor 466 553 IPR032675 -
Vra9g0017 577 Gene3D Ribonuclease Inhibitor 4 394 IPR032675 -
Vra9g0017 577 Gene3D Ribonuclease Inhibitor 395 465 IPR032675 -
Vra9g0017 577 PANTHER UNCHARACTERIZED 5 228 - -
Vra9g0017 577 PANTHER UNCHARACTERIZED 400 546 - -
Vra9g0017 577 PANTHER NODULIN-LIKE PROTEIN 400 546 - -
Vra9g0017 577 PANTHER NODULIN-LIKE PROTEIN 5 228 - -
Vra9g0017 577 SUPERFAMILY RNI-like 176 551 - -
Vra9g0017 577 SUPERFAMILY RNI-like 46 221 - -
Vra9g0017 577 SMART LRR_CC_2 289 314 IPR006553 -
Vra9g0017 577 SMART LRR_CC_2 176 201 IPR006553 -
Vra9g0017 577 SMART LRR_CC_2 494 519 IPR006553 -
Vra9g0017 577 SMART LRR_CC_2 341 366 IPR006553 -
Vra9g0017 577 SMART LRR_CC_2 469 493 IPR006553 -
Vra9g0017 577 SMART LRR_CC_2 421 445 IPR006553 -
Vra9g0017 577 SMART LRR_CC_2 91 116 IPR006553 -
Vra9g0017 577 SMART LRR_CC_2 202 227 IPR006553 -
Vra9g0017 577 Pfam Leucine Rich repeat 421 435 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0017 Vra-Chr9 144248 146514 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0017 K10268 - gmx:100819538 892.878