Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0016 ATGACTGTGAAAGATTTTCCTGAAGAATGTTGGGAATCAGTCTTCAGATTCCTTGGCCTTGGTCATCATCATTTGGAGTCTCTATCTCTGGTTTGCAAGCAGTTTCTTGCCATTACAAATAGGCTTCACTTTTCTCTCACAGTGTATGATCCAACCATTCCACTTCTTCCTCGGTTGTTCCTTAGATTTCCAAGGCTCAAAATCTTAGACCTGAGTCTCTTGAATGGCCACCATGAAGGCTTGCTTCGTCAAATTTCACAATCTGGGTTGGAGCTTGATTTGATTAATCTATCCAACCAGAGAACACTTCCTGTTGATGGCTTGCGAGAACTTGGCTCAAACATGAAAAATTTGAGGGTTCTGATCTGCTCAAACATTGGCTCTCTTCGTGATAGTCATCTGGTAATCATAGCTTATTGTTTCCCATTGCTTGAAAAGCTTGACATAAGCTTCCCATTGAATTCTCAAGCATCTGATTTTGGGGTTCTAAGGCTGTCTTCTATGCTTGAGCATCTTCGCAAGATTAATATCTCTGGTAATCATTTGATCACTGATAAATCATTGTTCTCCCTTTGCCAAAACTGTTTGTCATTGGAAGAGATTTCATTCTTCATCTGTTTTAAGATCACTCAAACAGGCATTGCCTCTGCGATCCGCCTCAGACCCGGTTTGAGCTCCATTGCCTTTAACATTGAAAAGAAAAGAATACATGGACCTGGTTTAACACTCACCCCCATTGACTTGAATTTGATCGATTCATTCAGGACATTGAAAAGGTTAAATGCTATTGATTTGTCCAATTCTGTTATCTCGGATGAGTTTCTCTTTGCGGTTGCAGAAGGTGCAGGTCTTCTGCTAAAGAAGCTTATCCTCCAAGACTGTTGCAATTGTACATTTTCAGGAATCTCTTATGTGTTATCCAAATGCCAATCTGTTCAATGCTTGGATCTTCGGAAAGTTGATTTTTTAACTGATCAATGTATCAGCAAGTTATCTGTATTTCTTCTTAGCCTAACCACTATAAACCTCAGTGGTTGTTGCCAGCTGACAAATTCAACATTTTTCATTCTCACAAGAAACTGTCCTTTGCTCAGTGAGATCAAAATGGAAAGGACATATCTTGGGGTGGAAGGGGAAGAAGATTCAATGAGGGATTTTTCTGTCAACCATGAAGTGAAAAAAGTGTTTTTGGGTGATAATGTTTTGCTGAGTGATGCAAGTTTGGTAAAATTTGTTTCCATTTGCCCCAGTTTGCAGCTTCTTGACTTATTCGGTTGTGAGGGTGTTTCTGGTGAAGGTGTTGTTGAGGTTTTGAAGAGATGCAGTGAGATAAGGCATTTGAACCTGGCTAATACAGGAATGAAAGTGTTTGATATAGACTTTGAAGTTTCGAACCTGAAGGTGTTGAAGTTGTCAGGGTCAAAAATTGAGGATGAAACTCTCTCAGTAATTTCAAGAAGGTGTGATGGACTGCTACTTCTGGACATTCAGAGTTGCTGGCGTGTTACAGCAAAGGGTGTTAGAGAAGTAGTAGAAAACTGCAAGACATTGAAGGAGTTGAATCTGAAGAATTGTAGGTTGGTGAGTGATGATTTTGTTGCTTGGTTGGAGTTTTCAAAACCATCATTGAGAATAATAGTCACACCTACTGATGTTGGTGCTTATTACTGA 1671 0.3968 MTVKDFPEECWESVFRFLGLGHHHLESLSLVCKQFLAITNRLHFSLTVYDPTIPLLPRLFLRFPRLKILDLSLLNGHHEGLLRQISQSGLELDLINLSNQRTLPVDGLRELGSNMKNLRVLICSNIGSLRDSHLVIIAYCFPLLEKLDISFPLNSQASDFGVLRLSSMLEHLRKINISGNHLITDKSLFSLCQNCLSLEEISFFICFKITQTGIASAIRLRPGLSSIAFNIEKKRIHGPGLTLTPIDLNLIDSFRTLKRLNAIDLSNSVISDEFLFAVAEGAGLLLKKLILQDCCNCTFSGISYVLSKCQSVQCLDLRKVDFLTDQCISKLSVFLLSLTTINLSGCCQLTNSTFFILTRNCPLLSEIKMERTYLGVEGEEDSMRDFSVNHEVKKVFLGDNVLLSDASLVKFVSICPSLQLLDLFGCEGVSGEGVVEVLKRCSEIRHLNLANTGMKVFDIDFEVSNLKVLKLSGSKIEDETLSVISRRCDGLLLLDIQSCWRVTAKGVREVVENCKTLKELNLKNCRLVSDDFVAWLEFSKPSLRIIVTPTDVGAYY* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0016 556 SMART LRR_CC_2 514 541 IPR006553 -
Vra9g0016 556 SMART LRR_CC_2 488 513 IPR006553 -
Vra9g0016 556 SMART LRR_CC_2 257 281 IPR006553 -
Vra9g0016 556 SMART LRR_CC_2 335 360 IPR006553 -
Vra9g0016 556 SMART LRR_CC_2 415 440 IPR006553 -
Vra9g0016 556 SMART LRR_CC_2 169 194 IPR006553 -
Vra9g0016 556 SMART LRR_CC_2 195 220 IPR006553 -
Vra9g0016 556 PANTHER UNCHARACTERIZED 334 540 - -
Vra9g0016 556 PANTHER UNCHARACTERIZED 4 330 - -
Vra9g0016 556 SUPERFAMILY RNI-like 53 373 - -
Vra9g0016 556 Gene3D Ribonuclease Inhibitor 459 548 IPR032675 -
Vra9g0016 556 Gene3D Ribonuclease Inhibitor 379 458 IPR032675 -
Vra9g0016 556 PANTHER NODULIN-LIKE PROTEIN 4 330 - -
Vra9g0016 556 PANTHER NODULIN-LIKE PROTEIN 334 540 - -
Vra9g0016 556 SUPERFAMILY F-box domain 4 45 IPR036047 GO:0005515
Vra9g0016 556 Gene3D Ribonuclease Inhibitor 1 233 IPR032675 -
Vra9g0016 556 Gene3D Ribonuclease Inhibitor 234 377 IPR032675 -
Vra9g0016 556 SUPERFAMILY RNI-like 296 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0016 Vra-Chr9 140539 142959 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0016 K10268 - gmx:100811565 909.442