Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0007 ATGTCAAATGGTCCTTCTAAATCAACCTTTGACGAGCATCGATGGGTGATTCACATCCGCAAAACCCTCGAAGAAGAGCTCCAGGAAGATGCTGAATTTGCTGTATCCATCTTCAGTGTGCCCAAGCTTCTCATGGCAAGTGATCCTGACTCTTACGTTCCCCAACAGGTTGCGATTGGTCCTTACCATTATTGGCGTCCTGAGCTATATGAGATGCAAAGGTACAAGATTGCAGCAGCAAAAAGATTCCAAAAACGTCTGCAAAGCTGCAACTTGGATACTCTGATTGATCAATTGACCAAGTTGGAGCAAAGGGTTCGATCATGCTACCACAAGTTCTTGGATTTCAACGGGGAAACACTGGTGTGGATGATGGCAGTTGACGCCTCCTTCTTGCTTGAGTTCCTTCAGGTTTATGCCATGCAGGAAGGAGCAAAGGTGCAAAGGGTTTCCAGCAGCATGTCGCATTTGGTGGACTATGCTGGGAAGAAATCAGCTCACAATGCCATTTTGAGAGACATTGTGATGCTTGAGAATCAAATCCCGTTATTTGTGTTGAGAAAGATGCTGGAGTTCAAATTCTCATCACTGGAAGCTGCTGATGACATGCTGAGCATGATGTTCATAGGGCTGTTCAAAGAGATTTCTCCCTTCAAAATGATGGAGGAGTATCCAAACATTCAGGTGTCAGAGAGCGTGCATTTGCTAGATTTCTTGTACGATTTGATAGTGCCAAAATCAGAACAACAACCAGACACAATCGAAGCTGAGTTGCCTTGGAAAATCGTTTCCAACCTTCCAGGACTGAAGCTTCTGAAGCAACCTGTTGAATATTTCTTCTTTTCTCAAGAAAAAGGAGAAAGTGTGAGTTCAAGCAGTAAAAGTCTCATGAACAAGCCACCCTCAGTGGAGGAAATCACGATTCCTTCTGTTACAGATCTCTTGAACTGTGGTGTTCGTTTTGTAGCTACTGCTGGAAGCATATCAAACATGAGTTTTGACACCAAAACGCGAACTTTTTATCTTCCCACAATAGGTTTGGATGTTAACAGTGAAGTTTTCCTGAGAAACTTGGTTGCGTATGAAGCATCGGTTGCATCGGGGCCGTTGGTTATAGCCCGTTACACAGAGTTGATGAACGGGATTATAGACTCGGAGGAAGATGCAAAGATTCTGAGAGAAAAAGGGATAATTATGAACCATTTGAAGAGTGATAAAGAGGTGGCTAACCTGTGGAATGGAATGAGCAAGTCGTTGAGATTGTCAAGGGTGGCAGAATTGGACAAAGTGATTGAAGATGTTAACAAGTACTATAACTGTAGATTGAAGGTTAAAGTTGTGAAGTTCATGAAGGCTTATGTGTTTAGTTCTTGGCAGTTTTTGACATTCCTTGCTGCCATATGCCTCTTGCTCTTGATGGCTTTGCAAGCTTTTTGCTCTGTCTACACTTGCACTCGTTTTTTCCAATCTGCACTCAATTCCACTGATTAA 1491 0.4292 MSNGPSKSTFDEHRWVIHIRKTLEEELQEDAEFAVSIFSVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQRYKIAAAKRFQKRLQSCNLDTLIDQLTKLEQRVRSCYHKFLDFNGETLVWMMAVDASFLLEFLQVYAMQEGAKVQRVSSSMSHLVDYAGKKSAHNAILRDIVMLENQIPLFVLRKMLEFKFSSLEAADDMLSMMFIGLFKEISPFKMMEEYPNIQVSESVHLLDFLYDLIVPKSEQQPDTIEAELPWKIVSNLPGLKLLKQPVEYFFFSQEKGESVSSSSKSLMNKPPSVEEITIPSVTDLLNCGVRFVATAGSISNMSFDTKTRTFYLPTIGLDVNSEVFLRNLVAYEASVASGPLVIARYTELMNGIIDSEEDAKILREKGIIMNHLKSDKEVANLWNGMSKSLRLSRVAELDKVIEDVNKYYNCRLKVKVVKFMKAYVFSSWQFLTFLAAICLLLLMALQAFCSVYTCTRFFQSALNSTD* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0007 496 Pfam Plant protein of unknown function 37 472 IPR004158 -
Vra9g0007 496 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 5 248 IPR004158 -
Vra9g0007 496 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 257 485 IPR004158 -
Vra9g0007 496 PANTHER UPF0481 PLANT-LIKE PROTEIN 5 248 - -
Vra9g0007 496 PANTHER UPF0481 PLANT-LIKE PROTEIN 257 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0007 Vra-Chr9 68127 69806 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0007 - - vra:106773048 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0007 9 68127 69806 Vra9g0007 9 68127 69806 ECH