Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0001 ATGGCTTTGAGATCGGTGTCTCGACGGTTGGGGACTAAACTCTTCCCTGCGTTATCTTCCACTTCAAGGCTACTACATTCTCACGCCACCAGTTTTGGGTTTAAACATGTAAACGAAGAGGATAAGGCTCGCATGGTTGGTGATGTCTTCACGAGCGTTGCTTCGAGCTACGATTTAATGAATGACCTAATGAGTGCTGGATTGCACAGATTGTGGAAGGATAGGTTAGTTTCCAAGCTGAATCCCTTTCCTGGAATGAAGCATCTTGATGTGGCTGGTGGCACAGGGGATGTTGCTTTTAGAATCTTGGAGAGCATAAACAAAGTTAAGCTGAGAGGACTTCAAGGTGTTTTTCAAGATACTTTAGAGGCAGAAACTCGGATTTATGTATGTGATATTAACCCTCAGATGTTAAATGTTGGCAGAGAGCGAGCTTTGGAGAAGGGTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCTTGAGTTTCCAAAATGATTCAATGGATGGTTATACTATTGCATTTGGGATAAGAAATGTCACACACATAGAGAAAGTACTCAGTGAAGCTCATAGGGTATTGAAACCAGGAGGAAGGTTCCTTTGCCTTGAACTTAGCCACGTTGGTATTCCTATATTTAAAGATTTGTATGATTATTATTCTTTCTCAGTTATTCCATACATGGGCGAGCTGGTTGCTGGTGATCGAGAATCCTATCAGTACTTAGTTGAGAGTATCAGGCGTTTCCCCTCACAGGAAAAATTTGCATCGATGATAGCCAATGCTGGGTTCCAGAAAGTAGAGTATGAGAATCTAGTCGGGGGAGTGGTTGCTGTCCATTCAGGGCTAAAAATCTGA 873 0.4284 MALRSVSRRLGTKLFPALSSTSRLLHSHATSFGFKHVNEEDKARMVGDVFTSVASSYDLMNDLMSAGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILESINKVKLRGLQGVFQDTLEAETRIYVCDINPQMLNVGRERALEKGFGEDGSLVWVEGNAESLSFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKPGGRFLCLELSHVGIPIFKDLYDYYSFSVIPYMGELVAGDRESYQYLVESIRRFPSQEKFASMIANAGFQKVEYENLVGGVVAVHSGLKI* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0001 290 PANTHER 2-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIAL 1 289 - -
Vra9g0001 290 Pfam ubiE/COQ5 methyltransferase family 42 289 IPR004033 GO:0008168
Vra9g0001 290 PANTHER METHYLTRANSFERASE 1 289 - -
Vra9g0001 290 Gene3D Vaccinia Virus protein VP39 52 290 IPR029063 -
Vra9g0001 290 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 284 IPR029063 -
Vra9g0001 290 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 41 289 IPR004033 GO:0008168
Vra9g0001 290 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 57 72 IPR023576 GO:0008168
Vra9g0001 290 CDD AdoMet_MTases 87 207 - -
Vra9g0001 290 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 37 289 IPR004033 GO:0008168
Vra9g0001 290 ProSitePatterns ubiE/COQ5 methyltransferase family signature 2. 197 211 IPR023576 GO:0008168
Vra9g0001 290 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 46 289 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0001 Vra-Chr9 754 3682 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0001 K06127 - gmx:100794692 540.806