Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2659 ATGGAATCGAAGGAAGAAACTGCCGGCGCCGGGGAGGCGAGCCTGGATGGGCTACCGTCGGCTCTGGTGGCGACCGTCATGACGAAGCTGGACATCGCCTCCATCTGCTCCCTCGCCTCCACCTCCTCCGTCTTCCGCTCCTGCGCCCGTCACATCCTTTCTTTCCTCCCCTCCTTCAACCTCCTCGACACTGCTCCCTCCGGCGACATGCTCAGACCCTTGTTGCCGCCCAATCCCTACCTCACCACTCTCAAGCTCGATTGTTCCCGCCTCGATGACTCCGCCATCGCCTTCCTCCTCAAACCCTCCCTCCAAGATCTCTCTCTCCACAATTGCGCCGATTTCAGTGGCAGACTCTTGTCTGAGATCGGCAACCGCTGCAAGGATCTAAGGTCTCTTTACCTTGGCTCCGTCGCCGAGAAAAGAGGGAGGGCCATTCATATTTCCGATCTAGAGGAGTTGCTCAGCGGTTGCTCCCACTTGGAAGCATTGATTCTGATGTTTGATGTCTCTCTCTTTCTACGGCACAATTTTGCTCGAGTTTGGGCTTCTGCCTCAGAGAAACTCACTTCTCTTGAGATTGGCTACATTTCTTCAGTTACCGTCACTGAACTGCTCAGCCCAAATCTGGGATCCCATCTGCCCTCAAATCCTGTTCAACCGTCTATACTTCCAAGCATTCAGAAACTGTGTCTAAATGTAGACTATATAACCGATGCTATGATCGGCACAATATCCAAAGGTCTAATGTTTTTGACGCATTTGGATCTTCAAGATGCACCATTGATTGAACCAAGAGTTACGTTTGACCTAACCAATGCTGGTCTTCAACAAATTAATCAACTTGGGAGATTGAAACATCTTTCACTGGTTCGAAGCCAGGAGTTTCTCATTACCTACTTTCGAAGAGTGAATGATCTGGGATTGCTTCTAATGGCAGACAAGTGTGCAAACATGGAAAGCATATGCCTTGGTGGCTTTTGTCGCGTCACAGACACCGGTTTCAAAACCATCCTGCATTCTTGCACTCGCTTGTACAAGCTTAAGGTCACTCATGGGACTCATTTGACTGATCTAGTTTTTCATGATATTTCCGCAACATCCCTTACTTTGACACATGTTAGCTTAAGACGGTGCAATCTGTTAACTAACCATGCTGTTTTGAGTTTGGCATCAAACAAGGGACTCAAAATTCTTGACCTGAGGGATTGCAGAAGCCTTGGGGACGAAGCTCTCCTGGCCATTGGCACTCTGCCTAGACTGAAAGTTCTACTATTAGATGGCTCTGATATAACTGATGCAGGACTTTTGTACTTGAGAGCATCTGTTATTAGTTCACTGTATGCATTGTCTCTTCGCGGCTGCAAGAGACTAACGGATAAATGTATCACAGCTCTATTTAATGGCTGTTGCGTGCTGGAATTGCGAGAACTGGATCTATCCAATCTTCCTAACTTCTCGGATAATGGAGTTTTGCTGCTTGCAAAAAGTAGGATTCCCTTTTTTGAGCTCCGTATGCGACAATGCCCTCTGGTTGGTGATACTGCAGTCATGGCATTAGCTTCAATGCTGATTGACGAGGCCAAACATGGAAGCAGTTTGCGATTGCTGGATCTTTATAACTGTGGTGGCATTACAGCGCTTGCATTTCGCTGGTTGAAGAAACCGTATTTTCCAAGGCTCAAATGGTTGGGAGTGACAGGGAATGTTAACATAGACATGGTAGTAGATGCCTTAGCCAGAAGCAGACCCTTCTTACATGTGGCATCCCATGGTGAGGAGCTTGGGGCAGATCCCTACGATACTTCAGATGGGTTATACACACATGATTATGATGACGTGGATGAGTTTGAGCAGTGGCTTCTTGAAGCAGATATTGACAGTGACTTTGAAGAGATAGGCGATGCTGAAAATAATGATGAAATGGTTGCGTGA 1935 0.4739 MESKEETAGAGEASLDGLPSALVATVMTKLDIASICSLASTSSVFRSCARHILSFLPSFNLLDTAPSGDMLRPLLPPNPYLTTLKLDCSRLDDSAIAFLLKPSLQDLSLHNCADFSGRLLSEIGNRCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCSHLEALILMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSHLPSNPVQPSILPSIQKLCLNVDYITDAMIGTISKGLMFLTHLDLQDAPLIEPRVTFDLTNAGLQQINQLGRLKHLSLVRSQEFLITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTILHSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKGLKILDLRDCRSLGDEALLAIGTLPRLKVLLLDGSDITDAGLLYLRASVISSLYALSLRGCKRLTDKCITALFNGCCVLELRELDLSNLPNFSDNGVLLLAKSRIPFFELRMRQCPLVGDTAVMALASMLIDEAKHGSSLRLLDLYNCGGITALAFRWLKKPYFPRLKWLGVTGNVNIDMVVDALARSRPFLHVASHGEELGADPYDTSDGLYTHDYDDVDEFEQWLLEADIDSDFEEIGDAENNDEMVA* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2659 644 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 18 566 - -
Vra8g2659 644 PANTHER UNCHARACTERIZED 18 566 - -
Vra8g2659 644 SUPERFAMILY RNI-like 304 573 - -
Vra8g2659 644 SUPERFAMILY F-box domain 5 51 IPR036047 GO:0005515
Vra8g2659 644 SUPERFAMILY RNI-like 51 292 - -
Vra8g2659 644 SMART LRR_CC_2 472 497 IPR006553 -
Vra8g2659 644 SMART LRR_CC_2 394 418 IPR006553 -
Vra8g2659 644 SMART LRR_CC_2 503 523 IPR006553 -
Vra8g2659 644 SMART LRR_CC_2 101 126 IPR006553 -
Vra8g2659 644 SMART LRR_CC_2 316 341 IPR006553 -
Vra8g2659 644 SMART LRR_CC_2 444 469 IPR006553 -
Vra8g2659 644 SMART LRR_CC_2 531 556 IPR006553 -
Vra8g2659 644 SMART LRR_CC_2 368 393 IPR006553 -
Vra8g2659 644 Pfam Leucine Rich repeat 396 415 IPR001611 GO:0005515
Vra8g2659 644 Gene3D Ribonuclease Inhibitor 64 497 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2659 - - pvu:PHAVU_007G016400g 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2659 8 44486837 44489476 Vra8g2659 8 44486837 44489476 ECH