Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2648 ATGGAGGGTTTAGCAGGTTTGAGCCATCTTTTTGTGACCATATTTCTAACTGGGCTTGGTGGTATCATAGCTATTCCTTCAATCACAGATGTTACCATGGCTGCACTTTGCCCTGGTCAAGATCAGTGCTCCCTTGCCATTTACCTCTCTGGTATCCAACAAGCTATGGCTGGAGTGGGATCAGTGGTGATGACACCACTCATAGGAAACTTGTCCGACAGATATGGCAGGAAAACTTTGATCACTCTTCCTCTCACTCTCTCAGTCATTCCTTATGTGATATTGGCATATAGCCGGGAGACCAAATTCTTCTATGCGTACTATGTCGTGAAAACTCTTGCTTCCATGGCAGGCGAAGGGTCCTTCCACTGCCTGGCTTTAGCATATGTGGCAGACAAGGTTCCAGATGGGAAACGAACATCCGCATTTGGGATACTTGCTGGTGTTGGATCAGCATCATTCGTTGGTGGAACATTAGCAGCTCGTTTCCTATCCACTGCCTTGACATTTCAGGTTGCTGCTGTCTTGTCAATGATTGCATTGGTGTACATGAGAATTTTCCTTAAGGATAGTGTACCTGGTGGTGGTGTGAGCCAGCCATTGTTGAAAGAGGTGGAGGAGACATGTGCTGAGGATGCTTCATCACGAAAAAGGGCAACAGGAGCATTTAAGAAACTGCCCTCTCTGGGGGATTTGATTTGCTTGCTCAAGTGTAGTCCCACGTTCTCGCAAGCAGCAGTTGTTTCGTTCTTCAATAGTCTTGTGGACGGTGGCTTGATGGCTGTGTTGCTGTACTATTTAAAGGCACGCTTTCAATTCAACAAGAACCAGTTTGCAGATTTGTTGATGATTACTGGGGTTGGAGCTACTCTTGCACAACTATTTCTCATGCCCATTTTAGTGCCTGTTATAGGAGAGGAGAAACTACTCTCCACAGGGCTCTTGATTGGCTGCATAAATGTCCTTGTCTACAGCATAGCATGGTCAGCATGGGTTCCTTATGCTCTAGCAGGTTGCTCTATATTCTCAGTTTTTGTGCGGCCAAGTTTATGCAGCATTGCATCGAAGCAAGTTGGACCTACAGAACAGGGAATGGTTCAAGGATGCCTTTCTGGAATTAGTTCCTCCGCCAACATCATTGCTCCGTTAGTTTTCAGTCCACTGACAGCCTTATTCCTGTCAGAAAATGCTCCGTTTTATTATCCTGGCTTCAGTCTAATGTGCCTTGGGCTAGCGATGATGATAGCATTTTTTCAGAGCCTAATGATCCGAGCTGCTCCTCCTATTGCGGTTGGAAAAATTAGCAATAGCCGCTGCACGGATACTTTGGTCTGA 1335 0.4599 MEGLAGLSHLFVTIFLTGLGGIIAIPSITDVTMAALCPGQDQCSLAIYLSGIQQAMAGVGSVVMTPLIGNLSDRYGRKTLITLPLTLSVIPYVILAYSRETKFFYAYYVVKTLASMAGEGSFHCLALAYVADKVPDGKRTSAFGILAGVGSASFVGGTLAARFLSTALTFQVAAVLSMIALVYMRIFLKDSVPGGGVSQPLLKEVEETCAEDASSRKRATGAFKKLPSLGDLICLLKCSPTFSQAAVVSFFNSLVDGGLMAVLLYYLKARFQFNKNQFADLLMITGVGATLAQLFLMPILVPVIGEEKLLSTGLLIGCINVLVYSIAWSAWVPYALAGCSIFSVFVRPSLCSIASKQVGPTEQGMVQGCLSGISSSANIIAPLVFSPLTALFLSENAPFYYPGFSLMCLGLAMMIAFFQSLMIRAAPPIAVGKISNSRCTDTLV* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2648 444 Pfam Major Facilitator Superfamily 10 382 IPR011701 GO:0022857|GO:0055085
Vra8g2648 444 Gene3D MFS general substrate transporter like domains 8 423 IPR036259 -
Vra8g2648 444 CDD MFS_SLC46_TetA_like 10 422 - -
Vra8g2648 444 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 6 430 - -
Vra8g2648 444 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 6 430 - -
Vra8g2648 444 ProSiteProfiles Major facilitator superfamily (MFS) profile. 13 428 IPR020846 GO:0022857
Vra8g2648 444 SUPERFAMILY MFS general substrate transporter 43 417 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2648 Vra-Chr8 44401231 44406383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2648 2 437 Organic Solute Cotransporters AT2G16990 46.652 9.23e-128 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2648 - - gmx:100803054 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2648 8 44401231 44406383 Vra8g2648 8 44401231 44406383 ECH