Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2647 ATGGGCAGTCCAAAGAAAGTTTCACCATCAAGAAGAAGCCCAAAGAAAAACTCAAGAACTCTCCATGATCTCTTTGTGCAGGAGAGTCCTCACTTCACCATCCCATCTTCTTCTCCCACTTCAGGAAATGAAGATCTTCTCTCCACTATTTCTTATTGCACCTTTGTTTTCACCTTCACCGACCCTTCAGAATCTCCGGCGCAAAGAGACTCAAAGAGGCTTCAACTCACAAGACTCGTCTCGATATTGAAGTCTTCCAAGAAACCGGTGCATGGAAAAGTTTTGGTGGCTCTAGCGGCCATGATATCTGCCAACCTCTTCAGGCCACTCCCTCCACCTTCCAGCCCTTCTGCCATCACGGATTTGCCTGAAGAAGAATACCCCGTTTCTATATTTTCTCCTCTGTGGTCACATCTCCAAATTGTTTACGAGATACTTCTTAAGCTTGTTAACAGCACAGACCAGAAGATACTGAGAGAGTGCGTCGATCATTCTTTCCTCCGCAACCTGTTAGCACTTTTCCAGTCAGAAGATCCGAGGGAACGTGAGACTTTGAAAAATGTGTACCACAAGATATATTCCAAGTTCATTTCTGATCGTTCCTTCATGAGGAAATCAATGACCGAGGTGCTCTTGAACTACGTTTTTGAGACAGAGAAGCATCCGGGTATTGCAGACTTGCTTGAGATATGGGGAACCATAATCAATGGGTTTACCGTGCCGCTCAAGGAAGAACACAAACTGTTCCTGATGAGAGTGCTCATTCCTCTACACAAGACCAAGGGGATGCAAGTGTACCATAAGCAATTGGCTTATTGCGTGTCACAGTTTGTGCAGAAGGAACCTATGCTTGGAGGGGTTGTTGTCAGAGGGATTTTGAGGTACTGGCCTGTCACAAACTGTCAAAAAGAAATTTTGCTAATTGGGGAGTTGGAAGATCTTGTTGAGAATTTAGACCCTGACCAGTATCGTAAGTTGGCCTTGCCCTTCTGTACCCAGATTACCAAATGCATAAACAGTTGGAATTCTCAGGTAGCGGAGCGTGCACTGTATATGTGGAACAATGAGCAGTTCGTGAAAATGGCACTGATAGGAACAGTGGAAGTGTTTAATGTGATTGTTGAAGGCATGGAAAAGAACCTGAAGTGGCATTGGAGCAAGAGCGTTAGACAACTAACGGAAAGTGTGAAGGTGATGCTGGAAGAAATGGATCCAGATCTGTATTCAAAGGGTCTCGTGGACATGGAAGCTAAAGAATCAATGGCACATCTAGAAGATATCAAAAGAAAAAAGAAATGGGAAAGAATAGAATGGGAAGCTGCCAAGAATCAGTTTCTCAACCCACAACGTTATATACGTGTCTCCTACTGA 1371 0.442 MGSPKKVSPSRRSPKKNSRTLHDLFVQESPHFTIPSSSPTSGNEDLLSTISYCTFVFTFTDPSESPAQRDSKRLQLTRLVSILKSSKKPVHGKVLVALAAMISANLFRPLPPPSSPSAITDLPEEEYPVSIFSPLWSHLQIVYEILLKLVNSTDQKILRECVDHSFLRNLLALFQSEDPRERETLKNVYHKIYSKFISDRSFMRKSMTEVLLNYVFETEKHPGIADLLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHKQLAYCVSQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPFCTQITKCINSWNSQVAERALYMWNNEQFVKMALIGTVEVFNVIVEGMEKNLKWHWSKSVRQLTESVKVMLEEMDPDLYSKGLVDMEAKESMAHLEDIKRKKKWERIEWEAAKNQFLNPQRYIRVSY* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2647 456 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 35 440 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra8g2647 456 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 10 441 - -
Vra8g2647 456 Gene3D - 39 438 IPR011989 -
Vra8g2647 456 SUPERFAMILY ARM repeat 45 435 IPR016024 -
Vra8g2647 456 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 10 441 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2647 Vra-Chr8 44389468 44391800 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2647 K11584 - gmx:100802007 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2647 8 44389468 44391800 Vra8g2647 8 44389468 44391800 ECH