Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2641 ATGGGATGTGTTGCTTCCAAACTAGAGGAAGAAGAGGAAGTTGTGTCTATTTGTAGAGAGAGAAAACGGCTGTTAAAGCTAGCTGTGGAGAAAAGATATGCACTTGCTGTGGCTCATTGTAAGTATTTTCACTCTCTCAATGCAGTAGCTGCGGCCATTAAGCTCTTTGTTGCACGCCACTCTTCACCTTCATCACCTTTCCTCATAACTTTCCCTCCTCCTTGCCCTTCTTCTCACTCTCCTTCTCCACCCTCCGAGAATGTCATCACTAACCCCATGTTCCTCCAGCAGACACCCTCAGAAACCAAGCATGAAGCCATTGCCTGTGACTCATGCATCTCTTCAACATCCTCAGACTCTTCTGAGGAAGAGACTGAAGAAAAAAGGGAAGGAGAAAGTGAACGCAAGGGAGAAGAACCGCAGCACGAACAACCATGTGGGTACTATTGCATGCCTGTGACTATGCCTATGTCCATGTCGATGTCCATGCCCGTGCCTATGCCCATGCCACCTTCAATGCCATCCCCTCAGAGAGATTTTGGATGGGACTTCTTCTACCCTTTTGACAGTTTGAGGAGTGATATGTGCGGCTACCACAGGAACTCAGACGATGATTTGAGGGCAGTGAGGGAGGAGGAAGGGATTCCTGAGTTGGAGGAAGAAGTGGAGAGAGAAGAGGTTGAGCACAAAGTGGTGACTGTTGAAGAGAATAATAATAATAATAATAATAATAAAAGTAACAGTGAAGGTGTTGCGGAGCAAGTTATTAGTGGTGTTGAAACAGTGAAGGTGGTGGATGTGGCCACTGAGAATCAAGGGGAGCAAAGGGGGCTTGCAGTTCTTGATACACCTGCAGAGGGGAGAGAGCTGCTTGAAGCATTGAAAGACATCGAAGACCATTTTCTCAGGGCTTATGATTCTGGAAAAGATGTCACCAGAATGCTGGAAGCTAATAGAATCCCCCTTCATTCTAGTTTGGATGAAATAAAAGAAAGTTCGACTAAACTCATTCAGGCAATAACATGGAAATCCATTTCATCTAGGCAATCGTCATGCAAGAGTCTCATGGCTCCAAATACGAAAAATTCCTCAACTTGGGTGGAATATAAGAATGATCTGTTTGATGATTATGAAGGAATGGATTCGGGAAGTCATTTATCAACCTTAGGAAGGTTATATGCATGGGAAAAGAAACTCTATGAGGAGGTTAAGGCTGGAGATAGCACAAGGAAAAGTTATGAAAAAAAATGTGCACAGTTGAGAAGTAAGAATGTTAGAGGAGATGATCTGCTGAGCACAGACAAAACCAAAGTTGAAGTGAAAGATCTGTATGCCGGGATCTTGGTTGCGATCCGACGGGCAGAATCAATCTCAAAGAGAATTGAGAAAATGAGAGATGAAGAACTACAACCTCAAATTGTTGAACTGTTAAAAGGCCTGACCCAGTCATGGAAAATCATGTTGGAGTCCCATGAAACCCAGAAGAAGATTCTGTCTGAAGTGAAGTACTTCACATGCACCACGTATGAGAAATTCTGTAACCAGTCTCATGGATTTGCAACTCTTCAACTGGAAGCTCAGCTTCGAAATTGGCGTGACTGCTTCAAAGAGTACACTGCAGCACAAGAAGCGTATGTTGAAGCATTACACGGATGGCTGAGTAAGTTCATAGTCCCTGAAGTCGAGTTTTACTCGAGAAGCAAAAACGTCGCCTTGCCGTACGAAGTGAACGGACCACCTCTGCTTGTAATATGCAACGATTGGTTAGCTTCCATGCAGAAGTTACCTGATAAAATGGTAACACTGGCATTGAAAAGCGTGGTGAAAGATGTTAGAGCTTTGTGGCTTCAGCAAAACAAAGAGCAACAGCAGAAAAGGAAGGTAGATAGGTTAACAAGAGTTTTGGACAGAAGATACTCTTCAGGAGGACTACCTAAAGTGGAGACAAAGATGCTTGAGCTGCATGCCACTGATCACGAATCAAAATGGAGTACTACTGATGAACAAGATGAGTGCATGATGGAGAAAAATGATCATGTGGAGACACTGAGAAGAAAACTTGAAGTGGAGAAGGAGAAGCACCACAGTAGCATGCAGGAAACACAGAGGATCACGTTACATGGATTGCAATCTGGGTTTTCTCTAGTGTTTGAATCCTTGTCGGAGTTCTCCAAAGCATCACAGAAAATGTACAATGATCTTCAGGTGAAAAGTAAGATAAAGGAGGGAATATGA 2235 0.4358 MGCVASKLEEEEEVVSICRERKRLLKLAVEKRYALAVAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPPCPSSHSPSPPSENVITNPMFLQQTPSETKHEAIACDSCISSTSSDSSEEETEEKREGESERKGEEPQHEQPCGYYCMPVTMPMSMSMSMPVPMPMPPSMPSPQRDFGWDFFYPFDSLRSDMCGYHRNSDDDLRAVREEEGIPELEEEVEREEVEHKVVTVEENNNNNNNNKSNSEGVAEQVISGVETVKVVDVATENQGEQRGLAVLDTPAEGRELLEALKDIEDHFLRAYDSGKDVTRMLEANRIPLHSSLDEIKESSTKLIQAITWKSISSRQSSCKSLMAPNTKNSSTWVEYKNDLFDDYEGMDSGSHLSTLGRLYAWEKKLYEEVKAGDSTRKSYEKKCAQLRSKNVRGDDLLSTDKTKVEVKDLYAGILVAIRRAESISKRIEKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCTTYEKFCNQSHGFATLQLEAQLRNWRDCFKEYTAAQEAYVEALHGWLSKFIVPEVEFYSRSKNVALPYEVNGPPLLVICNDWLASMQKLPDKMVTLALKSVVKDVRALWLQQNKEQQQKRKVDRLTRVLDRRYSSGGLPKVETKMLELHATDHESKWSTTDEQDECMMEKNDHVETLRRKLEVEKEKHHSSMQETQRITLHGLQSGFSLVFESLSEFSKASQKMYNDLQVKSKIKEGI* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2641 744 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Vra8g2641 744 Coils Coil 208 244 - -
Vra8g2641 744 Pfam Protein of unknown function (DUF632) 290 612 IPR006867 -
Vra8g2641 744 PANTHER UNCHARACTERIZED 1 738 - -
Vra8g2641 744 PANTHER OS09G0542500 PROTEIN 1 738 - -
Vra8g2641 744 Coils Coil 673 693 - -
Vra8g2641 744 MobiDBLite consensus disorder prediction 112 146 - -
Vra8g2641 744 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2641 Vra-Chr8 44309674 44314864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2641 1 627 Acyl Lipid Metabolism Gene Families AT2G27090 29.023 1.46e-60 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2641 - - gmx:100807897 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2641 8 44309674 44314864 Vra8g2641 8 44309674 44314864 ECH