Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2639 ATGGCGTTTTGGCACCGAATCGGAAAGGCGAAGCTCAGAACCCTCTGCACCCAATTCCAACGATCTTACATTCATCTTCACCATGCTTCTGCCCCCAAACCCTGCCATATGGACATTCCACGGCCGAATTCTGTGTTTCATGCCAGACCCCCAAGCGTTTTCAGTACGGTGAGGTTCTTCGCTGCCCCTGTTCAGTTTCAGGTAAAGCACAAGAACGAGGAGGATGATCCAAGTGAGCAACGGTTGAATGAGAAAATCAAAGCTCCATATGTCAGGCTTGTTGTGGGTGATGACCATTCAATAGTACCAAGGTTTGAAGCATTGCAACGTGCCAAGGCGCTTAAACTTGATTTAGTTGAGGCTGACAAGACACTAAAAAAGGATGTTAAAGAAGTGCGATTTTCTGAAAAAATTGGAGCACAAGACCTAAAGAACAAAGCAGATACGGTTAGAAAGTTAATGGAGAAGGGTTATCGAGTGAAGTGCAAGGTATCATCAAGCAAAGAAGATCAGGACTTGGCAGCATTATTTTCTCCTTTCCTTGCTCTGCTGGGAGATGCGTGCATTGTGGAAAGTGGACCATTTATGGCAAAAAAAGATGCATATATGATAGTCAGACACATTAAGTATGGGGTAGCCAAGAAAAGTGGGAAAAAATTTTCTAATGCAGCAAATATAGAGACTTCAACAGCCAATCCTAGTGATTCTGTTGAATATGAGAGTCATGCAGAATCGAACATGACTTATTCTCCTGACTATCAAACAAATGCTGATGCAGAATCAGCCTTTCTGTCAAGAAGTAATGATCCTATATCTCCTCCTGTTTCTGAAAACAGGTATAGGAGAACTAAACCTCAAGGTGAAAATAACGACCAATCTAATGCACAAGTTTCTCCTGCTGAGACTGAGAATAGATACAAAAGAGTAGAGCCAAGAAACAGATTCCAGCAAACATCAAATAACATGAACAACTACCAAGGTCCAGGAACAAGAGATGCATTCAGGCCGCCCCCGCCGAATCAGAATTGGCCAAGGCAAGCTCAGGGGAATGTTAATGTTGATACCAGAATAGAAAATAACAGGCAAGCTTTCACTCCTCCTGGTTATGGAAATTTTAGAGGTCCAAATGGGGGAATCCCTAAGCATGCTGGTGCTCCCAATAGCCCAAGACCCAGTTATGGCAATTTCAGTGCTTCAAATGATGGCCTCCCCAGGCATCCCAATGCTCCTGATACTCGGAAGACCTTCTAG 1251 0.4365 MAFWHRIGKAKLRTLCTQFQRSYIHLHHASAPKPCHMDIPRPNSVFHARPPSVFSTVRFFAAPVQFQVKHKNEEDDPSEQRLNEKIKAPYVRLVVGDDHSIVPRFEALQRAKALKLDLVEADKTLKKDVKEVRFSEKIGAQDLKNKADTVRKLMEKGYRVKCKVSSSKEDQDLAALFSPFLALLGDACIVESGPFMAKKDAYMIVRHIKYGVAKKSGKKFSNAANIETSTANPSDSVEYESHAESNMTYSPDYQTNADAESAFLSRSNDPISPPVSENRYRRTKPQGENNDQSNAQVSPAETENRYKRVEPRNRFQQTSNNMNNYQGPGTRDAFRPPPPNQNWPRQAQGNVNVDTRIENNRQAFTPPGYGNFRGPNGGIPKHAGAPNSPRPSYGNFSASNDGLPRHPNAPDTRKTF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2639 416 MobiDBLite consensus disorder prediction 228 347 - -
Vra8g2639 416 MobiDBLite consensus disorder prediction 313 328 - -
Vra8g2639 416 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 80 128 IPR036787 GO:0003743|GO:0006413
Vra8g2639 416 MobiDBLite consensus disorder prediction 228 274 - -
Vra8g2639 416 Pfam Translation initiation factor IF-3, N-terminal domain 82 123 IPR019814 GO:0003743|GO:0006413
Vra8g2639 416 MobiDBLite consensus disorder prediction 287 301 - -
Vra8g2639 416 PANTHER TRANSLATION INITIATION FACTOR IF-3 123 414 IPR001288 GO:0003743|GO:0006413
Vra8g2639 416 PANTHER TRANSLATION INITIATION FACTOR IF-3 1 123 IPR001288 GO:0003743|GO:0006413
Vra8g2639 416 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 128 209 IPR036788 GO:0006413
Vra8g2639 416 Gene3D - 124 214 IPR036788 GO:0006413
Vra8g2639 416 PANTHER TRANSLATION INITIATION FACTOR IF3-1, MITOCHONDRIAL 1 123 - -
Vra8g2639 416 PANTHER TRANSLATION INITIATION FACTOR IF3-1, MITOCHONDRIAL 123 414 - -
Vra8g2639 416 MobiDBLite consensus disorder prediction 364 416 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2639 K02520 - vun:114192546 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2639 8 44274784 44280589 Vra8g2639 8 44274784 44280589 ECH