Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2636 ATGGAATCATCAGTAGTTGAAAACATTGTGATTGTGGGAGCTGGAATTGCTGGTCTTGCAACATCCTTGGCACTTCACAGGTTGGGTGTGAGAAGTTTGGTGTTAGAATATTCGGATAGTTTAAGGGTGACTGGGTTTGCTTTAACAACATGGACGAATGCTTGGAAAGCCTTGGATGCTCTTGGCGTCGGAGACATTCTTCGTCACCAACATCTCCAACTACAACAGAATGTGACAACATCTTTGAGCATGGGGCAGCAAACTTCAAGCTTGTGCCTCATGGGCACAGGAAAACATGGAGACGGTGAAGTTCGATGTGTTCGAAGACAATTAATGATAGAAGCACTTGCTAAGGAACTTCCCAGTGGGACAATCAGGTTCTCGTCAAAGGTTGTTGCAATTCAAGAATCTGGCCTCTTCAAGATACTGCATCTTGCTGATGGAACAACCATAAAAACAAAGGTATTGATTGGGTGTGATGGAATAAACTCTGTGGTGGCGAAGTGGTTGGGCTTCAAGGAGGCATCTTTTACTGGGAGATACGTGATCAGGGGTGATATAAAGTTGATGAACAACCATGGCCTTCAGCCAAATTTCATGCACTTCTTTGGAAAAGGCTTTCGATCGGGTGTTCTGCCTTGTGATGAAACAACTGTGTATTGGTTTTTTACTTGGACTCCAACCACTGAAGAGAAGGAGCTGGTGAAGAATCCAGGCAAAATGAAGCGATTGGTGTTGGAGAAGTGTGAGAAGATGCCGAGTCATATGAGATGCTTTATAGAGAAAACAGAAGCAGAAGATATCTTAACATCTCCGTTGAGATATAGAAAGGTGTGGGAGCTTGTGTCAGGAAATATCAGCAAAGGCAATGTTTGTGTTGTTGGAGATGCTTATCACCCGATGGCGCCTGACCTTGGTCAAGGTGGATGTTGTTCCTTGGAAGATGGGATTGTCTTAGGCAGGTGCTTAGCTCAGGCATTCTGCAAAAAGGGTGAGACTGAGGAGCAATACAAGGAAATCGAAGCTTGCTTGAGGAAATATGAAAAAGAGAGAAGATGGAGAAACATCGATATCAGTGTTACATCTTATGTTCTGGGGTTTCTTCTGCAAGGTGATTTGAAATTTCTGGCTCATGTGAGAGACAAAGTTTTGCCTCATTTCCTAGCTGGGTTGCTGTTGAACAAGTCAGATTTTGATTGTGGAAAACTCAACACCTCTGATTAA 1224 0.4346 MESSVVENIVIVGAGIAGLATSLALHRLGVRSLVLEYSDSLRVTGFALTTWTNAWKALDALGVGDILRHQHLQLQQNVTTSLSMGQQTSSLCLMGTGKHGDGEVRCVRRQLMIEALAKELPSGTIRFSSKVVAIQESGLFKILHLADGTTIKTKVLIGCDGINSVVAKWLGFKEASFTGRYVIRGDIKLMNNHGLQPNFMHFFGKGFRSGVLPCDETTVYWFFTWTPTTEEKELVKNPGKMKRLVLEKCEKMPSHMRCFIEKTEAEDILTSPLRYRKVWELVSGNISKGNVCVVGDAYHPMAPDLGQGGCCSLEDGIVLGRCLAQAFCKKGETEEQYKEIEACLRKYEKERRWRNIDISVTSYVLGFLLQGDLKFLAHVRDKVLPHFLAGLLLNKSDFDCGKLNTSD* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2636 407 SUPERFAMILY FAD/NAD(P)-binding domain 8 389 IPR036188 -
Vra8g2636 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Vra8g2636 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 - -
Vra8g2636 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 - -
Vra8g2636 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 - -
Vra8g2636 407 PANTHER MONOOXYGENASE 2-RELATED 5 405 - -
Vra8g2636 407 Pfam FAD binding domain 9 334 IPR002938 GO:0071949
Vra8g2636 407 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 5 405 IPR044560 -
Vra8g2636 407 Coils Coil 330 350 - -
Vra8g2636 407 Gene3D - 8 382 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2636 Vra-Chr8 44241530 44244054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2636 1 404 Miscellaneous Gene Families AT5G05320 48.780 5.40e-139 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2636 - - pvu:PHAVU_007G018700g 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2636 8 44241530 44244054 Vra8g2636 8 44241530 44244054 ECH