Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2571 ATGCCCGAGATGGACGAGGGCGAGGTTATAGATCAACCTCTGACGGCCATAGCAGAGGCGTTTGAGGAGCTGTCGAAGTGGATGAAGGAGAATAGCGGCGGCCACCACATTCGCCTCGACAATTTCTGCGAGGTCGCCTCTCTCGTCTCCGTTCTCTTCCGTTGTCTCGGCCTCGCTTTCAAATTTGCTGAATTGGAATACGTCGCCAAGCTAGAAGGACTATTGGAAGCATCAAAGACATGTCCCACTCTACAGGATATTCTTGAAGTTGATGTTGGCAATGATACAGTGAAAACATCTGGAAGCTATTCCCGTAATCTGCGTAGAGTTCGGCAGGGTCTTGATCTCGTCAGAGCTATATTCGAACAACTTTTATCTACTGAAGATTCTTCTCTAAAAGACGTGGCTTCAACAGCTTATGGGCAGGTATGTGCACCATACCACACATGGGCGGTACGAACAGCCGTGTACGCTGGGATGTATACACTTCCAACCAGAGAACAACTTTTGATGAAGCTCAATGAAACAGAGCAATCAGCCGAGAAAAAGATGAAAAGGTATATTGCTGCCTCACTTCCGATTATAGAATACATTGATAGTCTGTACGTTTCTCGAAATATTACGTTGGACTGGTGA 636 0.4654 MPEMDEGEVIDQPLTAIAEAFEELSKWMKENSGGHHIRLDNFCEVASLVSVLFRCLGLAFKFAELEYVAKLEGLLEASKTCPTLQDILEVDVGNDTVKTSGSYSRNLRRVRQGLDLVRAIFEQLLSTEDSSLKDVASTAYGQVCAPYHTWAVRTAVYAGMYTLPTREQLLMKLNETEQSAEKKMKRYIAASLPIIEYIDSLYVSRNITLDW* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2571 211 SUPERFAMILY Glycolipid transfer protein, GLTP 31 210 IPR036497 -
Vra8g2571 211 Coils Coil 166 190 - -
Vra8g2571 211 Gene3D Glycolipid transfer protein 6 211 IPR036497 -
Vra8g2571 211 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 9 211 - -
Vra8g2571 211 Pfam Glycolipid transfer protein (GLTP) 37 175 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vra8g2571 211 PANTHER ACD11 HOMOLOG PROTEIN 9 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2571 Vra-Chr8 43685186 43689300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2571 10 211 Acyl Lipid Metabolism Gene Families AT4G39670 64.563 1.95e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2571 - - gmx:100818548 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2571 8 43685186 43689300 Vra8g2571 8 43685186 43689300 ECH