Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2548 ATGGCAATAGAAGTGTGCTCCGAGATATCCAGCACGGGAATCAGCCCTCGAATCTCCTTCTCCCACGATCTGAAGAACACGGAAGATGCATCCGTTCGTGTCGAAGATCGCCACCGTGGATCAGAGCTGTGCCTCTTGGACTCGAGCTCTGACTTCGTCTTCTGCATCACCAATGGCTTACCTCAACATCTCTCTTCCGCCGATGAACTCTTCTCTAATGGCAAGATTGTCCCGGCGGAGATCAAAAGCGTTCCCAAAAAACCTTCACATCCTCCTCGATCTCAACCTGCTACCACGGAAAAGATTCAAAGAAAGAGGCTCAAGGAGTTCTTGTCTGCTTCCTCTGACGAAGCAGAGAACGAAGAAGAAAAACCATCATCCAAGTATTTCTGGCAATTCAAGCGCAGTAGCAGTTTGAATTTCGATACCACCCGTGGTAATGGTTTGATTCGCTCGCTTCAGTTCTTGTCACGAAGCCACTCAACCGGTTCGGCCCTGAATCCAAAGCAAACAGAGGTTCCAAGGGAAAGTCACAAGCAGAAGCTGCAGAAACAATCCTCTGTTTCAAGCAGAAGGTCATCGTCTTCCTCTTCGAGTTCAAGTACATATTACTTTTATAGTTCGTCTCAAAAAGCTTCGTTAAAGAAAAACGGTGGATATTCGGGTAATGGTGTTAGAATAAGTCCTGTTTTGAATCTACCACAAGCATATATTCCGAAAGCCACTGCCAGATTTTTTGGATTTGGTTCCCTATTCTGTAATGGAAAGATTAAAAGAAAGAAGAAATAG 789 0.4525 MAIEVCSEISSTGISPRISFSHDLKNTEDASVRVEDRHRGSELCLLDSSSDFVFCITNGLPQHLSSADELFSNGKIVPAEIKSVPKKPSHPPRSQPATTEKIQRKRLKEFLSASSDEAENEEEKPSSKYFWQFKRSSSLNFDTTRGNGLIRSLQFLSRSHSTGSALNPKQTEVPRESHKQKLQKQSSVSSRRSSSSSSSSSTYYFYSSSQKASLKKNGGYSGNGVRISPVLNLPQAYIPKATARFFGFGSLFCNGKIKRKKK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2548 262 MobiDBLite consensus disorder prediction 82 103 - -
Vra8g2548 262 MobiDBLite consensus disorder prediction 183 202 - -
Vra8g2548 262 Coils Coil 104 124 - -
Vra8g2548 262 MobiDBLite consensus disorder prediction 160 202 - -
Vra8g2548 262 PANTHER OS06G0675200 PROTEIN 1 262 - -
Vra8g2548 262 PANTHER COPPER-BINDING PERIPLASMIC PROTEIN 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2548 Vra-Chr8 43393338 43395056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2548 - - gmx:102663072 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2548 8 43393338 43395056 Vra8g2548 8 43393338 43395056 ECH
Vra8g2548 8 43393338 43395056 Vra1g0614 1 7107534 7109313 ECH
Vra8g2548 8 43393338 43395056 Vra7g3154 7 51288301 51289863 ECH
Vra8g2548 8 43393338 43395056 Vra4g1349 4 20191576 20193151 ECH