Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2463 ATGGGTGCTCTTGATTTCCTTTCTGACTACTTCTCAGTTTCCACCCCAAAAANGAAACGCAAACCAATGCAGACTGTTGAAATCAAAGTGAAAATGGACTGTGATGGCTGTGAAAGAAGAGTTCGCAATTCTGTTTCCAACATGTCAGGTGTGAAAGAGGTCGAAGTGAATAGAAAACAAAGCAAGGTAACAGTAACAGGTTACGTGGATAGAAACAAGGTCCTAAAGAAAGTACAAGGAACAGGAAAAATAGCTGAGTTTTGGCCTTATATTCAGTACAACTTGGTGGCATATCCCTACGTGGCACAAGCATATGACAGGAAAGCACCATCTGGGTATGTGAAAAACACTGAACAAGCACTTCCCAACCCAAACGATGAGAAACTCACCTCTCTCTTCAGTGATGACAACCCTAATGCATGTTTAATCATGTAA 435 0.4115 MGALDFLSDYFSVSTPKXKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKEVEVNRKQSKVTVTGYVDRNKVLKKVQGTGKIAEFWPYIQYNLVAYPYVAQAYDRKAPSGYVKNTEQALPNPNDEKLTSLFSDDNPNACLIM* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2463 144 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 144 - -
Vra8g2463 144 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 144 IPR045181 GO:0046872
Vra8g2463 144 SUPERFAMILY HMA, heavy metal-associated domain 22 89 IPR036163 GO:0046872
Vra8g2463 144 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Vra8g2463 144 ProSiteProfiles Heavy-metal-associated domain profile. 32 87 IPR006121 GO:0046872
Vra8g2463 144 Gene3D - 10 88 - -
Vra8g2463 144 CDD HMA 27 86 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2463 Vra-Chr8 42650565 42651890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2463 - - gmx:100785059 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2463 8 42650565 42651890 Vra8g2463 8 42650565 42651890 ECH