Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2454 ATGGGCAAGAAAAAGTCTGATTCAAAGTCTGACCACAGTTACGAGAAGAAGCTCCAATTTTATTCCAAGGTGAAAGATGCTGTTGCCTCCTTGAGTGTCCAAAAGTCTATTTCGAAGAAAAAGAGCAAACAACAAAGACGGCAAAATAAATTGAAGGCATATAATCTATCTTCACTTTTAGAGTCCCTTCCTGAGGTGAGGGCATCAAAGAAACCAGGTCGTCAGAATGACTCCAAACTTAATTGTAAATCAAGGCAGACGTTGGTGTTGAGGGAAAGAGATCGAGTTTCTGCTGTTCTTAAGGATCCTTGTTTTCAAGCAGATCCCCTGTCCGCGATTCAGCATTACTTGCAGAAGACACAACCAGTTGTAGAAGAACAGCCTAAGAAAAAAGTGAACAAAAATGGATCCAAGAAGAAGAAGAAATCAAAGGCTTCAACTGGACTACAATCTATGGAAATTTAG 465 0.4 MGKKKSDSKSDHSYEKKLQFYSKVKDAVASLSVQKSISKKKSKQQRRQNKLKAYNLSSLLESLPEVRASKKPGRQNDSKLNCKSRQTLVLRERDRVSAVLKDPCFQADPLSAIQHYLQKTQPVVEEQPKKKVNKNGSKKKKKSKASTGLQSMEI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2454 154 PANTHER PROTEIN FAM207A 4 129 - -
Vra8g2454 154 MobiDBLite consensus disorder prediction 33 56 - -
Vra8g2454 154 Pfam Ribosome biogenesis protein SLX9 5 120 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Vra8g2454 154 MobiDBLite consensus disorder prediction 120 154 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2454 - - gmx:100527125 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2454 8 42562744 42564787 Vra8g2454 8 42562744 42564787 ECH