Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2447 ATGGACTCCGAAGCTACCATTAACGTGCTCATGGTCTCCTACCCAGGACAAGGTCATATAAACCCTTTCCTTAGACTTGCAAAGCTCCTTGCTGCTAATGGTTTGTTTGTAACGTTCTCCACCACAGAAATCGCTGGCAAACAAATGCGAACTACAAACAACATAACTCACAAATCAGTCACTCCAATTGGCAATGGTTTTCTCAAGTTCGAATTCTTTGAAGATGGTGGCATGACGGATGTTGACGCTGATGGTTCCAAGTTGAGAAGTCTCACTGACTTCAGTGCTCAGGTTGAGCATTTTGGGAGACAATATGTTTCCCAAGTCATCAGGGAGCATGCCGAGGCAAACCACCCTATTTCATGCATCATAAACAACCCCTTTGTTCCATGGGTTTGTGATGTAGCTGCCGACCATGGTATTCCTTCTGCCGTCTTATGGGTTCAATCTGCTGCTGTCTTAACAGCTTACTATAGTTATTTCCACAAACTGCTACCGTTTCCTTCTCAAGCCGATCCTTATCTTGATGTTCAATTGCCTTCTGTAGTCCTTAAGTACAATGAAGTTCCGGACTTTCTGCATCCTTTTAGTCCATATCCAGAACTAGGGACGGTCATACTGGAACAGTTTAAGAACTTATCCAAGCCATTCTGTGTGCTGGTGGATAGTTTTGAGGAACTAGAAAGTGATTACATAAACTATCTTTCAGAGTTTGTGAATATAAGACCCATTGGTCCTTTGTTCAAGATCCCAACAGCAACAGACACAAGTGATATCCGTGGTGATTTTTGGAAGAGTGATGATTGCATAGAGTGGTTGAACTCAAGGGCAGAGGCATCTGTGGTGTACATCTCCTTTGGGAGTATCGTGTGTCTGCCGCAAGAACAAGTGACGGAAATTGCACATGGATTATTGGACTCTCAAGTCTCGTTTTTGTGGGTTCTGAAACCACCTTTTGAGGAGTTTGGGCTCCCGCCTTACGTTCTTCCTGATAGGTTCTTGGAGGATACGAAAGAGAAGGGCAAAGTTGTGCAGTGGAGCCCACAAGAGAAAGTGTTGGGTCATGTTTCTGTGGCATGTTTTGTGACACACTGTGGTTGGAATTCATCGATGGAAGGTGTGGCATTGGGAGTGCCGATGTTGACATTTCCTGCATGGGGTGATCAGGTGACAAATGCCAAGTTCTTGGTGGATGTTTATGGGGTTGCCATTAAACTGGGTTATGGGCAGGCTGAAAAGAAACTTGTGAGCAGAGACGAGGTGAAGAAGCGCTTATTGGAAGCAACGGTAGGGCCAAAAGCAGAGGAGTTAAAGGAAAACGCGTTCAAGTGGAAGAAGGCTGCAGAGGCCGCAGTAGCTGTGAATGGTTCATCTGCCAGGAATCTTGATGCATTTCTCAAAGACATAAAAGAAGGTGGAGCTGTTAGTATCAATAAATGA 1440 0.4479 MDSEATINVLMVSYPGQGHINPFLRLAKLLAANGLFVTFSTTEIAGKQMRTTNNITHKSVTPIGNGFLKFEFFEDGGMTDVDADGSKLRSLTDFSAQVEHFGRQYVSQVIREHAEANHPISCIINNPFVPWVCDVAADHGIPSAVLWVQSAAVLTAYYSYFHKLLPFPSQADPYLDVQLPSVVLKYNEVPDFLHPFSPYPELGTVILEQFKNLSKPFCVLVDSFEELESDYINYLSEFVNIRPIGPLFKIPTATDTSDIRGDFWKSDDCIEWLNSRAEASVVYISFGSIVCLPQEQVTEIAHGLLDSQVSFLWVLKPPFEEFGLPPYVLPDRFLEDTKEKGKVVQWSPQEKVLGHVSVACFVTHCGWNSSMEGVALGVPMLTFPAWGDQVTNAKFLVDVYGVAIKLGYGQAEKKLVSRDEVKKRLLEATVGPKAEELKENAFKWKKAAEAAVAVNGSSARNLDAFLKDIKEGGAVSINK* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2447 479 CDD GT1_Gtf-like 8 439 IPR002213 GO:0008194
Vra8g2447 479 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 473 - -
Vra8g2447 479 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 6 473 - -
Vra8g2447 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 469 - -
Vra8g2447 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 401 IPR002213 GO:0008194
Vra8g2447 479 Gene3D Glycogen Phosphorylase B; 11 462 - -
Vra8g2447 479 ProSitePatterns UDP-glycosyltransferases signature. 346 389 IPR035595 -
Vra8g2447 479 Gene3D Glycogen Phosphorylase B; 258 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2447 Vra-Chr8 42516302 42518096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2447 7 472 Glycosyltransferase AT4G15480 51.812 4.56e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2447 - K23279 var:108322566 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2447 8 42516302 42518096 Vra8g2447 8 42516302 42518096 ECH