Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2435 ATGGTTTTCTCCAAGTTCCGACCGCTCGACGAGAAGACTCTCGTCGAATACATAAAGTCCGTTCCTGCGCTCTCCTCCAAACTCGCCAACAGTTTTGATGACTTGTCAGTTAAAGAAGTCGGAGATGGCAATCTTAACTTCGTGTACATTGTTTCCAACTCCGAAGGTTCTTTTGTCATCAAACAGGCTCTACCGTACGTTCGTTGCATTGGGGAATCGTGGCCTATGACAAAGGAGAGGGCTTATTTTGAGACGCTGGCACTGAAAGAAGAGGGTCGTTTGAGCCCTGCGCATGTCCCTGAAGTATATCACTTTGATCGTACCATGTCTTTGATCGCCATGCGTTACTTGGAGCCCCCGCATATAATCCTCAGAAAAGGGTTGATTGCAGGAATTGAATACCCTCTTTTAGCTGAGCATATGGCTGATTTCATGGCAAGGACACTCTTCTTCACGTCTCTGCTTTTCCGTTCTACTACTGAGCACAAACGAGACGTTGCCGAATTTTGTGGCAATGTGGAGCTATGCAGGCTTACTGAGCAGGTCGTTTTCTCTGACCCTTATAAAATTTCCGAATACAATCGTTGGACTACGCCATATCTTGACCGTGATGCTGAGGCTGTCCGGGAAGACAACTTGCTGAAGCTTGAAGTTGCTGAGCTGAAATCTCTGTTCATCGAGAGGGCCCAGGCACTATTACATGGTGATCTACACACTGGTTCTGTGATGGTTACTCGTGAATCAACTCAAGTTATTGATCCAGAATTTGCATTTTATGGACCAATGGGTTTTGATATTGGAGCATTCTTGGGAAACTTGATTTTGGCCTTCTTTTCTCAAGACGGACATGCTGATGAAACAAATGACCGAAAGGCCTATAAGGAGTGGATTCTGAAGACAATCGAAGACACATGGAACCTTTTCCATCACAAATTCACTTCACTTTGGGATGAGCACAGAAATGGTGCTGGTGAAGCGTATCTTCCAGCAATCTATAACAATCCCGAGGTTCAACTCCTTGTACAGAAGAAATACATGACAAATTTGTTTCACGATAGTCTTGGATTTGGTGCTGCTAAAATGATACGGAGAATTGTTGGTGTGGCGCATGTTCAGGATTTTGAATCCATTACTGATGCTGCCAAACGGGCAGCTTGTGAACGCCGAGCTCTTGAGTTAGCTAAGATGCTTCTAAAAGAAAGAAGAAAATTTGAAGGCATTGCTGAAATTATTTCAGCAATTCGGCAATACTAA 1254 0.4418 MVFSKFRPLDEKTLVEYIKSVPALSSKLANSFDDLSVKEVGDGNLNFVYIVSNSEGSFVIKQALPYVRCIGESWPMTKERAYFETLALKEEGRLSPAHVPEVYHFDRTMSLIAMRYLEPPHIILRKGLIAGIEYPLLAEHMADFMARTLFFTSLLFRSTTEHKRDVAEFCGNVELCRLTEQVVFSDPYKISEYNRWTTPYLDRDAEAVREDNLLKLEVAELKSLFIERAQALLHGDLHTGSVMVTRESTQVIDPEFAFYGPMGFDIGAFLGNLILAFFSQDGHADETNDRKAYKEWILKTIEDTWNLFHHKFTSLWDEHRNGAGEAYLPAIYNNPEVQLLVQKKYMTNLFHDSLGFGAAKMIRRIVGVAHVQDFESITDAAKRAACERRALELAKMLLKERRKFEGIAEIISAIRQY* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2435 417 PANTHER METHYLTHIORIBOSE KINASE 3 416 - -
Vra8g2435 417 PANTHER METHYLTHIORIBOSE KINASE 3 416 - -
Vra8g2435 417 TIGRFAM MTRK: S-methyl-5-thioribose kinase 38 412 IPR009212 GO:0009086|GO:0046522
Vra8g2435 417 Gene3D Phosphorylase Kinase; domain 1 1 120 - -
Vra8g2435 417 PIRSF MTRK 1 417 IPR009212 GO:0009086|GO:0046522
Vra8g2435 417 Pfam Phosphotransferase enzyme family 37 270 IPR002575 -
Vra8g2435 417 SUPERFAMILY Protein kinase-like (PK-like) 5 416 IPR011009 -
Vra8g2435 417 Gene3D - 121 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2435 Vra-Chr8 42416396 42420011 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2435 K00899 - gmx:100818359 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2435 8 42416396 42420011 Vra8g2435 8 42416396 42420011 ECH