Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2418 ATGACCATCGACATCAAGACCTTGGAAGACAGGTATGTTGATTCTTGCAGGAGACGGGGTGTTTTGGCTAATTCTTCTATTTTGTCAAGTCTTTTCAAGGCTGAGGTCAAAAAGTCCAATCATGAACTGTGCAAGCTGGAGATTTTAATTGATGACCTAAAGGATGTTGATATTGCTCCACTTCTTGACTTGTGCATGAACTTTGATGCTTCTGAAATAGAAGCTGTTGATGTACGTAATGAATCATCATGTGTATTAAATGGAGAACATGCATTGTCATTGATGCATGCTGTTAATAAAAAGCTTCGAGTAGTCCATCTACAGGATCTGTTACATGGGAAGGACTTCTTACGGGACATTTCACAAAGAGGTTTGACATGCCAAGTTTTGACATTGAGGTGCTCATGTTTCCGGAAGCTGAACTTAACGGGGAAGTTCATGCATATGCATACCCTAAATCTTGATTTCAGTACTTCCCTTACGAGTTTCCAGGAGGAATGTTTCAATTGTATGCCCAATCTAATGCGCCTCTCAATGTGTGATACAAGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGATTCCTTCTTTAGTTGAATTAAGGTTTCAATATTGGCAGTATTGCAATGATGCTGGGACATCTTTTACCTCATGCAGTGGGAAATCTGATGACACTGCTGATTTTAGCCTGCTTGATAGAATTCCTTTTATTGTTGAACCCTTCACCAATACAACTGAACTGACAGATCCCAACTTTAGTGCTGAAGATCCACTAAGGAATTTTTATTCCTTGGATGAAGAAGTTATAAATCATGATGTTCAAAGCATGGCTGAGGATTCGTCTGATGACAGTGAAGTTGACTTTGCTAGTCGTCATCATAGATACTGGTTGTCTTTTCCTGGGTGGAGTTCTGAAGCACCTCTTCTTTATGAGAATGAAGATGAAGCAGATTCATCTCAAGGCACTTTTGTGGAACCTATTACTGATGTTTCTATGAAGTATATGTCTCGCCATGCATCACCAATATGTTATGAGAAGCATTACAGAGAGTTCATGATTGCTTCATTGCCAAATTTGAAAAATTTAGATAATATGCCTATCAGAAAGATTGACAAGGAAAGGGCTACTGGAATATTTTCTCAATACTTTGAATATCTTCCATATAAATGGAAGCACAAAGAGAGTGTTGTAAGTATCTTACAGAAGAGAGAAATAAAATCAGGCCAGAATAAGGTGCACTCTTCCAAGAATAGGACGTCATATCCTTCTAGACAATCCCAATATTTTTATACTAGGTCTCTTTCTGCTGCTAAATTGGGATCCTCAACATGGCCTTTCTTGCATCCCCTTTCTCTATTAGGATGTGAACTGGACAAGGGCTTTCATCCAAGGCAGTTTGAGTATCATCCATCTGACTCCAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTAATCAACCATGAGAACGAACATATTGTTAGTTATATTCCATCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTCAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCACATACCAAGAAAAGTTACTGGCAGACATGGGAATTTTGGTTGGGTTACGTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAGAAATGTTGCTTTATATGACATCAACAGTGGGAAACGTTTACAAGTGTTCACAGATATGCATCGTGGACATATTAATGTAGTCAAGTTTGCTAATCATTCCCCATCAATTTTTGCCACTTCATCATTTGATCATGATGTGAAGATGTGGGACTTGAGACAAAAACCAATACACCCCTGCTTTACAGTTTCAAGCTCCAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCTTCTGCTGTTGATAATGAGGTTAGACAATATCTGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGGGACTACATCATAAGTGGGAGTTGTGATGAGCACGTTCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTAAGAGATATATCCCTTGAGGGAAGAAACTTAGGAAGTTCCGTGTTTGTTCAGTCTTTGAGGGGTGATCCTTTCCGGGATTTCAATTTGAGCGTGTTAGCAGCTTACATGCGGCCAGGCTCCAAGTCTAAAATTGTCAAGATTAACTTACTAGCATCTAGTGGCCATGCCAACAAGGATGATTCTTATGATCTGCACCCTTGTCCATTTCACAGCATGGGAGCTTGA 2409 0.3944 MTIDIKTLEDRYVDSCRRRGVLANSSILSSLFKAEVKKSNHELCKLEILIDDLKDVDIAPLLDLCMNFDASEIEAVDVRNESSCVLNGEHALSLMHAVNKKLRVVHLQDLLHGKDFLRDISQRGLTCQVLTLRCSCFRKLNLTGKFMHMHTLNLDFSTSLTSFQEECFNCMPNLMRLSMCDTRITNLWTTVAALSKIPSLVELRFQYWQYCNDAGTSFTSCSGKSDDTADFSLLDRIPFIVEPFTNTTELTDPNFSAEDPLRNFYSLDEEVINHDVQSMAEDSSDDSEVDFASRHHRYWLSFPGWSSEAPLLYENEDEADSSQGTFVEPITDVSMKYMSRHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATGIFSQYFEYLPYKWKHKESVVSILQKREIKSGQNKVHSSKNRTSYPSRQSQYFYTRSLSAAKLGSSTWPFLHPLSLLGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGRHGNFGWVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQYLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVRICCAQTGRRLRDISLEGRNLGSSVFVQSLRGDPFRDFNLSVLAAYMRPGSKSKIVKINLLASSGHANKDDSYDLHPCPFHSMGA* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2418 802 Pfam WD domain, G-beta repeat 603 632 IPR001680 GO:0005515
Vra8g2418 802 Gene3D - 465 750 IPR015943 GO:0005515
Vra8g2418 802 SMART WD40_4 591 632 IPR001680 GO:0005515
Vra8g2418 802 SMART WD40_4 553 588 IPR001680 GO:0005515
Vra8g2418 802 SMART WD40_4 637 675 IPR001680 GO:0005515
Vra8g2418 802 SMART WD40_4 495 537 IPR001680 GO:0005515
Vra8g2418 802 Gene3D Ribonuclease Inhibitor 100 381 IPR032675 -
Vra8g2418 802 SUPERFAMILY L domain-like 126 212 - -
Vra8g2418 802 SUPERFAMILY WD40 repeat-like 465 731 IPR036322 GO:0005515
Vra8g2418 802 ProSiteProfiles Trp-Asp (WD) repeats profile. 599 634 IPR001680 GO:0005515
Vra8g2418 802 SMART LRRcap_2 348 366 IPR003603 -
Vra8g2418 802 PANTHER BNAC09G30780D PROTEIN 2 787 IPR046377 GO:0071493|GO:0080008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2418 - - gmx:100806443 1475.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2418 8 42300600 42308538 Vra8g2418 8 42300600 42308538 ECH