Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2407 ATGAGCAGTGCTTTTCGCATGAACTCTGCTAAGATTTCTCATGTCATGGGGATGCAGAGGCACTTCATGTTGGTGAACCATGTCATTCATCCAATCAAAACCTCCTCTTTTCTCTACAACACAGTGCACTCTAAACCTTTTATTAGATTGCCACATTTCTTCAGAAAACCCAGAGAATATGAAAATTCTTTGTCTTTGTTCTGTTCGTCTTTTTGCTCTTCTTCCTCTTCTTCTTCATCTGCTGTTGCAACTTCCCTCTCCAAGGTTGGCTTTGTGAGTTGGTATTTGGGGATGATCAAGTCTTGGCCAATTTTGACAAAAAGTGTTACTTCTTCACTTATTTATATGGGTGCTGATTTATCTTCCCAGACTATTGTGCGGGAATCTTCAGAAGGTTTTGATTTTATGAGGACTTCACGCATGGCAGGATATGGGATGATCGTTTTAGGGCCATCTCTGCATTTCTGGTACAATTTTGTGTCAAAGCTTTTCCCGAGGAGGGATCTTTTCTCTACATTGAAGAAAATGGTCTTGGGTCAGACAATTTATGGACCTGCCATGACTGTTATTTTCTTATCCTTGAATGCACATTTGCAGGGTGAAACAGGGTCAGAGATAGTTGCACGCTTAAAACGTGATTTTCTTTCAACAATGCTCGGTGCAATTATGTATTGGCCTATATGTGATTTCATTACCTTTAAGTTCATTCCTGTCAATTTACAGCCATTGATCACCAATTCATTTTCGTTCTTGTGGACTGTTTATATGACGTATATGGCAAGCCTAGAGAAAGCAGCCTGA 801 0.3995 MSSAFRMNSAKISHVMGMQRHFMLVNHVIHPIKTSSFLYNTVHSKPFIRLPHFFRKPREYENSLSLFCSSFCSSSSSSSSAVATSLSKVGFVSWYLGMIKSWPILTKSVTSSLIYMGADLSSQTIVRESSEGFDFMRTSRMAGYGMIVLGPSLHFWYNFVSKLFPRRDLFSTLKKMVLGQTIYGPAMTVIFLSLNAHLQGETGSEIVARLKRDFLSTMLGAIMYWPICDFITFKFIPVNLQPLITNSFSFLWTVYMTYMASLEKAA* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2407 266 Pfam Mpv17 / PMP22 family 198 256 IPR007248 GO:0016021
Vra8g2407 266 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 4 265 IPR007248 GO:0016021
Vra8g2407 266 PANTHER OS12G0508100 PROTEIN 4 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2407 Vra-Chr8 42227271 42231175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2407 88 264 Miscellaneous Gene Families AT2G14860 67.797 1.14e-94 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2407 K13348 - gmx:100816797 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2407 8 42227271 42231175 Vra8g2407 8 42227271 42231175 ECH