Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2406 ATGACGATACCGAAACGAAGCTATTCCCGAATTGACACATTGGAGCTGAAAGCTCTAATTGTTAGGAAGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAGCTTCGAAGATTATTGAGTTCAAAGATAAGCAAGTCAGAGTTTGACAAAATCTGCATCGTGATAATTGGGAGGGAAAATATCCCTCTTCACAATCGACTAATTAGAGCAATTTTGAAGAATGCGTGTCTGGCTAAAGTCCCACCAGTGAGAGGCTCTGCAAAAGCAGGGAGTGCTTTTAGTGTAAAAGATTCAAATGGGCTGCAGAGGAGTTCTATCCAAACGTTGTATGGGGATGCGTTTCCTCCTTCGTTGCGGAGGATTGGCCCTTCAGCTGCTCGAGACCGAAGGTCCAAGGGCCGCCCAAATGTTTTGGGGCCCTTGGGAAAACCCCAATTTGGTCTTGCGTCTGATGAATTTATATGTAAAACACTGGAGCAGCAGAGTGCGACAGAACTGAATTCCCTTGGCAGTAGACCTCCAATTTCCGTTGAAGAAGGAGAGGAGGTTGAACAGATGGCTGGAAGCCCCAGCGTTCAAAGTAGAAGCCCTGTTACGGCTCCTCTTGGTATATCGATGAATTTTGTTCGTGGTGGAAGACGTCATTCTAATGTTTCATTATGTAGCAAGGGTTATCCAGAGACCTGTCACACCAATGGAGATCTCCCTGACACTAGATCTTTGAGGAGTCGTCTGGAGCAAAAGTTGGAGAAGGAGGGTTTGACCGCGACAGTAGATTGTGTAAATCTATTGAATAATGCACTGGATTCATACCTGAAGAGGTTGATTGAATCCTTTATGGATTTAGCTGGGTCAAGACGTGGAAATGAGCACCTAAGACAGCAAAACAGGCAGATGGCGACCGGTTCAAATTTGGTACCTGGAAGATGCATGCAAAAAGTAACTGGATCTGCGGATGCATCTATTTTAGATTTTCGCCTTGCAATGGAATTAAATCCTCAAGTTCTGGGACCAGATTGGCCTATACAACTTGAGAAGATTTGCATACGTGCCTCTGAAGATTGA 1068 0.4485 MTIPKRSYSRIDTLELKALIVRKVGHQRADKYFDQLRRLLSSKISKSEFDKICIVIIGRENIPLHNRLIRAILKNACLAKVPPVRGSAKAGSAFSVKDSNGLQRSSIQTLYGDAFPPSLRRIGPSAARDRRSKGRPNVLGPLGKPQFGLASDEFICKTLEQQSATELNSLGSRPPISVEEGEEVEQMAGSPSVQSRSPVTAPLGISMNFVRGGRRHSNVSLCSKGYPETCHTNGDLPDTRSLRSRLEQKLEKEGLTATVDCVNLLNNALDSYLKRLIESFMDLAGSRRGNEHLRQQNRQMATGSNLVPGRCMQKVTGSADASILDFRLAMELNPQVLGPDWPIQLEKICIRASED* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2406 355 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 354 - -
Vra8g2406 355 MobiDBLite consensus disorder prediction 118 144 - -
Vra8g2406 355 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 354 IPR024738 GO:0070461
Vra8g2406 355 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 283 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2406 Vra-Chr8 42223812 42225918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2406 - - gmx:100817344 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2406 8 42223812 42225918 Vra8g2406 8 42223812 42225918 ECH